Q0PIP4 (Q0PIP4_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
POMGnT1 EMBL ABH03465.1

Gene names

Name:	pomgnt1 ZFIN ZDB-GENE-070112-991
ORF Names:	zgc:158130 ZFIN ZDB-GENE-070112-991

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL ABH03465.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	653 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	protein N-linked glycosylation Inferred from electronic annotation. Source: InterPro
Cellular component	Golgi membrane Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0PIP4 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: E7EB4A5F4ACAF263	FASTA	653	74,952
	10 20 30 40 50 60 MDTWTPNPRA KPFIPRQQRS LYLTWKYRLT NKRAVRRICQ ASAVLFLLIT VIVNIKLILD 70 80 90 100 110 120 TRRVASEDDA AQEYDDALPN METPRRPASG RKVLDIEVYS SRSKVYVAVD GTTVLEDEIR 130 140 150 160 170 180 EQGRGIHVIV LNQATGHVMA KRVFDTYSPH EDEAMILFLN MVTRGRILIF TIKDEGTFHL 190 200 210 220 230 240 KDAAKNLLKG LGSQVAVTLG WRDMWTLVVK KGGQVYGEKH SKSPALSTWG DPVLLKTAVQ 250 260 270 280 290 300 LTASEEAECH WADTELNRRR KLFCSKVEGY GSICSCKDPA PIEFNPDPLS NNNVYNIPVA 310 320 330 340 350 360 VIAGNRPNYL YRMLRSLLSS HGVNPQMITV FIDGYYEEPM DVVDLFGLKG VQHTPISIKN 370 380 390 400 410 420 ARVSQHYKAS LTATFNLHPD ADFAIVLEED LDISIDFFSF LGQTIHLLHE DDSLYCISAW 430 440 450 460 470 480 NDQGYEHTAE DPSLLYRVES MPGLGWVLKK SLYKDELEPK WPTPEKLWDW DMWMRMPEQR 490 500 510 520 530 540 KGRECVIPDV SRSYHFGIIG LNMNGYFHEV YFKKHKFNTI PNVQMKNVEN LKKDPYEIEI 550 560 570 580 590 600 QNLLREAEVL DHSKNPCEDS FIPDTEGKTF VMFIKMEQET DTNTWTELAK CLHVWDLDVR 610 620 630 640 650 GYHKGLWRLF RKKNHILVVA VPISPYSVKK PSNVTPIHLE PAPKEEGPPV EQM

References

[1]	"Genes required for functional glycosylation of dystroglycan are conserved in zebrafish." Moore C.J., Goh H.T., Hewitt J.E. Genomics 92:159-167(2008) [PubMed: 18632251] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DQ826747 mRNA. Translation: ABH03465.1.
IPI	IPI00996193.
RefSeq	NP_001036152.3. NM_001042687.3.
UniGene	Dr.85699.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q0PIP4.
Protein family/group databases
CAZy	GT13. Glycosyltransferase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	571876.
KEGG	dre:571876.
Organism-specific databases
CTD	55624.
ZFIN	ZDB-GENE-070112-991. pomgnt1.
Phylogenomic databases
HOVERGEN	HBG055279.
InParanoid	Q0PIP4.
Gene expression databases
ArrayExpress	Q0PIP4.
Bgee	Q0PIP4.
Family and domain databases
InterPro	IPR004139. Glyco_trans_13. [Graphical view]
KO	K09666.
PANTHER	PTHR10468. Glyco_trans_13. 1 hit.
Pfam	PF03071. GNT-I. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0PIP4_DANRE

Accession

Primary (citable) accession number: Q0PIP4

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	November 16, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)