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Protein
Submitted name:

Voltage-dependent calcium channel splice variant 1.2-b

Gene

Cacna1c

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionCalcium channelUniRule annotation, Ion channel, Voltage-gated channelUniRule annotation
Biological processCalcium transport, Ion transport, Transport
LigandCalcium

Names & Taxonomyi

Protein namesi
Submitted name:
Voltage-dependent calcium channel splice variant 1.2-bImported
Gene namesi
Name:Cacna1cImported
Synonyms:CaV1.2-bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:103013. Cacna1c.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 44HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ0PCR5.

Structurei

3D structure databases

ProteinModelPortaliQ0PCR5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 55Ion_transInterPro annotationAdd BLAST55

Sequence similaritiesi

Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2301. Eukaryota.
ENOG410XNP6. LUCA.

Family and domain databases

InterProiView protein in InterPro
IPR005821. Ion_trans_dom.
IPR005452. LVDCC_a1dsu.
IPR002077. VDCCAlpha1.
PANTHERiPTHR10037:SF239. PTHR10037:SF239. 1 hit.
PfamiView protein in Pfam
PF00520. Ion_trans. 1 hit.
PRINTSiPR00167. CACHANNEL.

Sequencei

Sequence statusi: Fragment.

Q0PCR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
TMEGWTDVLY WVNDAVGRDW PWIYFVTLII IGSFFVLNLV LGVLSGEFSK
60 70 80 90 100
EREKAKARGD FQKLREKQQL EEDLKGYLDW ITQAEDIDPE NEDEGMDEDK
110 120 130
PRNRGAPAGL HDQKKGKFAW FSHSTETHVS MPTSETES
Length:138
Mass (Da):15,927
Last modified:September 19, 2006 - v1
Checksum:iC9528C40B999AF89
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei138Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB259050 mRNA. Translation: BAF03166.1.
UniGeneiMm.41628.
Mm.436656.

Similar proteinsi

Entry informationi

Entry nameiQ0PCR5_MOUSE
AccessioniPrimary (citable) accession number: Q0PCR5
Entry historyiIntegrated into UniProtKB/TrEMBL: September 19, 2006
Last sequence update: September 19, 2006
Last modified: September 27, 2017
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)