Skip Header

Contribute Send feedback
Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q0PCR4 (Q0PCR4_MOUSE)

Last modified January 19, 2010. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Hide | Top

Names and origin

Protein namesSubmitted name:
    Voltage-dependent calcium channel EMBL BAF03167.1
Gene names
Name: Cacna1c MGI 103013
Synonyms: CaV1.2-d EMBL BAF03167.1
OrganismMus musculus (Mouse) EMBL BAF03167.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

Hide | Top

Protein attributes

Sequence length113 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

Hide | Top

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein By similarity RuleBase RU003808V0.

Sequence similarities

Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. [View classification]

Hide | Top

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAF03167.1
Non-terminal residue1131 EMBL BAF03167.1

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
Q0PCR4-1 [UniParc].

Last modified September 19, 2006. Version 1.
Checksum: FABB7833C32A650D

FASTA11313,183
        10         20         30         40         50         60 
TMEGWTDVLY WVNDAVGRDW PWIYFVTLII IGSFFVLNLV LGVLSGEFSK EREKAKARGD 

        70         80         90        100        110 
FQKLREKQQL EEDLKGYLDW ITQAEDIDPE NEDEGMDEDK PRNMSMPTSE TES

« Hide

Hide | Top

References

[1]"Identification of a cardiac isoform of the murine calcium channel alpha1C (Cav1.2-a) subunit and its preferential binding with the beta2 subunit."
Murakami M., Ohba T., Takahashi Y., Watanabe H., Miyoshi I., Nakayama S., Ono K., Ito H., Iijima T.
J. Mol. Cell. Cardiol. 41:115-125(2006) [PubMed: 16787652] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Aorta EMBL BAF03167.1.
+Additional computationally mapped references.

Hide | Top

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB259051 mRNA. Translation: BAF03167.1.
IPIIPI00788391.
UniGeneMm.436656

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ0PCR4.

Genome annotation databases

EnsemblENSMUST00000078320; ENSMUSP00000077433; ENSMUSG00000051331; Mus musculus. [Genome view]

Organism-specific databases

MGIMGI:103013. Cacna1c.

Phylogenomic databases

HOVERGENQ0PCR4.

Gene expression databases

ArrayExpressQ0PCR4.
BgeeQ0PCR4.
GenevestigatorQ0PCR4.

Family and domain databases

InterProIPR005821. Ion_trans.
IPR005451. VDCC_L_a1csu.
IPR002077. VDCCAlpha1.
[Graphical view]
PANTHERPTHR10037:SF47. LVDCCAlpha1C. 1 hit.
PfamPF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSPR00167. CACHANNEL.
ProtoNetSearch...

Other Resources

SOURCESearch...

Hide | Top

Entry information

Entry nameQ0PCR4_MOUSE
AccessionPrimary (citable) accession number: Q0PCR4
Entry history
Integrated into UniProtKB/TrEMBL: September 19, 2006
Last sequence update: September 19, 2006
Last modified: January 19, 2010
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information