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Unreviewed, UniProtKB/TrEMBL Q0PAM5 (Q0PAM5_CAMJE)

Last modified June 16, 2009. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Two-component response regulator EMBL CAL34788.1
Gene names
Name: cbrR EMBL CAL34788.1
Ordered Locus Names: Cj0643
OrganismCampylobacter jejuni [Complete proteome] [HAMAP]
Taxonomic identifier197 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter

Protein attributes

Sequence length414 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

Binary interactions

With

Entry

#Exp.

IntAct

Notes

flgKQ0P8E91EBI-1193595,EBI-1191246

Sequences

Sequence LengthMass (Da)Tools
Q0PAM5-1 [UniParc].

Last modified September 19, 2006. Version 1.
Checksum: BD1FE6B47043F465

FASTA41446,667
        10         20         30         40         50         60 
MNKKILIIDD NKMLGKLLAK KIQMTLDYEV DIAFGFAEAK ELMNNDYFLA FVDLCLPDAP 

        70         80         90        100        110        120 
NGEVVDYVIE KKIPAIVLTA SGDKATKEKF MDKDILDYIF KESETCIDEI ISSIVKLNQY 

       130        140        150        160        170        180 
AKTKVIVAMS KLPERNEIKK ILTQRQFNVL AAAHGEEAMS YLNDNNDVKL IIADVNMPVI 

       190        200        210        220        230        240 
SGFELLTQVR ERFSDDELGV ILLGDHNDSF EANSFKNGVN EYLFKPLSKE SFNCRLDRCL 

       250        260        270        280        290        300 
SYMDDKKFLS TYNVLDPVSG VKNYNALIDG IDDYFNEIAT KDEEFAFAFL DIDNLQMIND 

       310        320        330        340        350        360 
EYGREVGDEV IKICANEIVN ETKGRDLVGR YSAEKICILL KNISQERAIK IFSRIRVNIK 

       370        380        390        400        410 
KAGVLVNLDE VFFTASIGVV FGKSGDKIDS LADKASKILS QAKDNGKDRV EVCS 

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References

[1]"The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences."
Parkhill J., Wren B.W., Mungall K.L., Ketley J.M., Churcher C.M., Basham D., Chillingworth T., Davies R.M., Feltwell T., Holroyd S., Jagels K., Karlyshev A.V., Moule S., Pallen M.J., Penn C.W., Quail M.A., Rajandream M.A., Rutherford K.M. expand/collapse author list , van Vliet A.H.M., Whitehead S., Barrell B.G.
Nature 403:665-668(2000) [PubMed: 10688204] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCTC 11168 / Serotype O:2.

Cross-references

Sequence databases

AL111168 Genomic DNA. Translation: CAL34788.1.
PIRB81413.
RefSeqYP_002344072.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ0PAM5. 38 interactions.

Genome annotation databases

GeneID904970.
GenomeReviewsGene locus Cj0643 in contig AL111168_GR.
KEGGcje:Cj0643.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ0PAM5.
OMAQ0PAM5. NRRYFYD.

Family and domain databases

InterProIPR000160. Diguanylate_cyclase-pred.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00990. GGDEF. 1 hit.
PF00072. Response_reg. 2 hits.
[Graphical view]
ProDomPD000039. Response_reg. 2 hits.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00267. DUF1. 1 hit.
SM00448. REC. 2 hits.
[Graphical view]
TIGRFAMsTIGR00254. GGDEF. 1 hit.
PROSITEPS50887. GGDEF. 1 hit.
PS50110. RESPONSE_REGULATORY. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0PAM5_CAMJE
AccessionPrimary (citable) accession number: Q0PAM5
Entry history
Integrated into UniProtKB/TrEMBL: September 19, 2006
Last sequence update: September 19, 2006
Last modified: June 16, 2009
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information