Unreviewed, UniProtKB/TrEMBL Q0PAK4 (Q0PAK4_CAMJE)

Names and origin

Protein names

Submitted name:
    RNA polymerase sigma-54 factor EMBL CAL34810.1

Gene names

Name:	rpoN EMBL CAL34810.1
Ordered Locus Names:	Cj0670

Organism

Campylobacter jejuni [Complete proteome] [HAMAP]

Taxonomic identifier

197 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Campylobacter

Protein attributes

Sequence length	416 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro transcription initiation Inferred from electronic annotation. Source: InterPro
Molecular function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct sigma factor activity Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
flaG	Q0PAW9	1	EBI-1193305,EBI-1191365

Sequences

	Sequence		Length	Mass (Da)
	Q0PAK4-1 [UniParc]. Last modified September 19, 2006. Version 1. Checksum: 4023AC5E70082C28	FASTA	416	48,574
	10 20 30 40 50 60 MLKQKITQAP KTKISQTLRS WLPILQANIE DLKENLDKFA EDNPFLNVQD SIQTHDKGKN 70 80 90 100 110 120 YFDSFYKHNV NSAFVDSKGL AKKSVYELLN EQILPPLFPT SKSQELAKKI IECLNEEGYF 130 140 150 160 170 180 EHDEEFLKEY SLEEIERVRA RFKFLDPVGV GAKDYKEAFL FALENMELDE DIDEFCRMLI 190 200 210 220 230 240 MDFENIQNYT KEPLYKEALA VLKRFSTPPF LEYFEDSRII VPDIFVYKEN GEIKVKINDD 250 260 270 280 290 300 YYPEISIQTD GLEHDFLSHY IKEAKNLVDA LAMRKATLYK IGLMIVEYQY DFFMGKEIKP 310 320 330 340 350 360 MTFKDLALDL ERNASTISRA VANKYLSCER GLIPLRDFFA FALDEEGETS NVGVKEFVAN 370 380 390 400 410 LVKNEDRNKP LSDSKILELI KEEFKVDIGR RTITKYRKHL NIASSTDRKK LYELEG

References

[1]

"The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences." Parkhill J., Wren B.W., Mungall K.L., Ketley J.M., Churcher C.M., Basham D., Chillingworth T., Davies R.M., Feltwell T., Holroyd S., Jagels K., Karlyshev A.V., Moule S., Pallen M.J., Penn C.W., Quail M.A., Rajandream M.A., Rutherford K.M. , van Vliet A.H.M., Whitehead S., Barrell B.G. Nature 403:665-668(2000) [PubMed: 10688204] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCTC 11168 / Serotype O:2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AL111168 Genomic DNA. Translation: CAL34810.1.
PIR	F81337.
RefSeq	YP_002344093.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q0PAK4. 61 interactions.
Genome annotation databases
GeneID	904991.
GenomeReviews	Gene locus Cj0670 in contig AL111168_GR.
KEGG	cje:Cj0670.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q0PAK4.
OMA	Q0PAK4. MRKATLY.
Family and domain databases
InterPro	IPR000394. RNA_pol_sigma_54. IPR007046. RNA_pol_sigma_54_core-bd. IPR007634. RNA_pol_sigma_54_DNA-bd. [Graphical view]
Pfam	PF00309. Sigma54_AID. 1 hit. PF04963. Sigma54_CBD. 1 hit. PF04552. Sigma54_DBD. 1 hit. [Graphical view]
PRINTS	PR00045. SIGMA54FCT.
TIGRFAMs	TIGR02395. rpoN_sigma. 1 hit.
PROSITE	PS00718. SIGMA54_2. 1 hit. PS50044. SIGMA54_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0PAK4_CAMJE

Accession

Primary (citable) accession number: Q0PAK4

Entry history

Integrated into UniProtKB/TrEMBL:	September 19, 2006
Last sequence update:	September 19, 2006
Last modified:	June 16, 2009
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)