Q0PA13 (RS15_CAMJE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S15

Gene names

Name:	rpsO
Ordered Locus Names:	Cj0884

Organism

Campylobacter jejuni

Taxonomic identifier

197 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Campylobacter

Protein attributes

Sequence length	90 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA By similarity. HAMAP MF_01343_B Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome By similarity. HAMAP MF_01343_B
Subunit structure	Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA By similarity.
Sequence similarities	Belongs to the ribosomal protein S15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 90	90	30S ribosomal protein S15 HAMAP MF_01343_B		PRO_0000115407

Sequences

	Sequence		Length	Mass (Da)
	Q0PA13 [UniParc]. Last modified September 19, 2006. Version 1. Checksum: 19A41B60BAB8180C	FASTA	90	10,226
	10 20 30 40 50 60 MALDSAKKAE IVAKFAKKPG DTGSTEVQVA LLTARIAELT EHLKIYKKDF SSRLGLLKLV 70 80 90 GQRKRLLSYL KRKDYNSYSK LITELNLRDK

References

[1]

"The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences." Parkhill J., Wren B.W., Mungall K.L., Ketley J.M., Churcher C.M., Basham D., Chillingworth T., Davies R.M., Feltwell T., Holroyd S., Jagels K., Karlyshev A.V., Moule S., Pallen M.J., Penn C.W., Quail M.A., Rajandream M.A., Rutherford K.M. , van Vliet A.H.M., Whitehead S., Barrell B.G. Nature 403:665-668(2000) [PubMed: 10688204] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCTC 11168 / Serotype O:2.

+

Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AL111168 Genomic DNA. Translation: CAL35006.1.

PIR

E81361.

RefSeq

YP_002344284.1. NC_002163.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3ULW	X-ray	2.36	A	1-90	[»]

ProteinModelPortal

Q0PA13.

SMR

Q0PA13. Positions 2-88.

ModBase

Search...

Protein-protein interaction databases

IntAct

Q0PA13. 20 interactions.

MINT

MINT-6484910.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

905176.

GenomeReviews

Gene locus Cj0884 in contig AL111168_GR.

KEGG

cje:Cj0884.

PATRIC

20058710. VBICamJej33762_0869.

Phylogenomic databases

HOGENOM

HBG500000.

OMA

TYLRNKD.

PhylomeDB

Q0PA13.

ProtClustDB

PRK05626.

Enzyme and pathway databases

BioCyc

CJEJ192222:CJ0884-MONOMER.

Family and domain databases

HAMAP

MF_01343_B. Ribosomal_S15_S13e_B.
[Tree]

InterPro

IPR000589. Ribosomal_S15.
IPR005290. Ribosomal_S15_bac-type.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]

Gene3D

G3DSA:1.10.287.10. S15_NS1_RNA_bd. 1 hit.

KO

K02956.

PANTHER

PTHR23321:SF10. Ribosom_S15_bac. 1 hit.

Pfam

PF00312. Ribosomal_S15. 1 hit.
[Graphical view]

SUPFAM

SSF47060. S15/NS1_bind. 1 hit.

TIGRFAMs

TIGR00952. S15_bact. 1 hit.

PROSITE

PS00362. RIBOSOMAL_S15. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

RS15_CAMJE

Accession

Primary (citable) accession number: Q0PA13
Secondary accession number(s): P49392, Q9PP46

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 1, 2007
Last sequence update:	September 19, 2006
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program