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Protein

30S ribosomal protein S15

Gene

rpsO

Organism
Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.UniRule annotation
Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciCJEJ192222:GJTS-852-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S15UniRule annotation
Gene namesi
Name:rpsOUniRule annotation
Ordered Locus Names:Cj0884
OrganismiCampylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
Taxonomic identifieri192222 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
ProteomesiUP000000799 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 909030S ribosomal protein S15PRO_0000115407Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.UniRule annotation

Protein-protein interaction databases

IntActiQ0PA13. 20 interactions.
MINTiMINT-6484910.
STRINGi192222.Cj0884.

Structurei

Secondary structure

1
90
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi5 – 1511Combined sources
Helixi25 – 5127Combined sources
Turni52 – 554Combined sources
Helixi56 – 7318Combined sources
Helixi75 – 8410Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IYLX-ray2.36A1-90[»]
ProteinModelPortaliQ0PA13.
SMRiQ0PA13. Positions 2-88.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S15P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0184.
HOGENOMiHOG000040097.
KOiK02956.
OMAiFKTHVKD.
OrthoDBiEOG6B368J.

Family and domain databases

Gene3Di1.10.287.10. 1 hit.
HAMAPiMF_01343_B. Ribosomal_S15_B.
InterProiIPR000589. Ribosomal_S15.
IPR005290. Ribosomal_S15_bac-type.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]
PfamiPF00312. Ribosomal_S15. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
TIGRFAMsiTIGR00952. S15_bact. 1 hit.
PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0PA13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALDSAKKAE IVAKFAKKPG DTGSTEVQVA LLTARIAELT EHLKIYKKDF
60 70 80 90
SSRLGLLKLV GQRKRLLSYL KRKDYNSYSK LITELNLRDK
Length:90
Mass (Da):10,226
Last modified:September 19, 2006 - v1
Checksum:i19A41B60BAB8180C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL111168 Genomic DNA. Translation: CAL35006.1.
PIRiE81361.
RefSeqiWP_002852579.1. NC_002163.1.
YP_002344284.1. NC_002163.1.

Genome annotation databases

EnsemblBacteriaiCAL35006; CAL35006; Cj0884.
GeneIDi905176.
KEGGicje:Cj0884.
PATRICi20058710. VBICamJej33762_0869.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL111168 Genomic DNA. Translation: CAL35006.1.
PIRiE81361.
RefSeqiWP_002852579.1. NC_002163.1.
YP_002344284.1. NC_002163.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IYLX-ray2.36A1-90[»]
ProteinModelPortaliQ0PA13.
SMRiQ0PA13. Positions 2-88.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ0PA13. 20 interactions.
MINTiMINT-6484910.
STRINGi192222.Cj0884.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL35006; CAL35006; Cj0884.
GeneIDi905176.
KEGGicje:Cj0884.
PATRICi20058710. VBICamJej33762_0869.

Phylogenomic databases

eggNOGiCOG0184.
HOGENOMiHOG000040097.
KOiK02956.
OMAiFKTHVKD.
OrthoDBiEOG6B368J.

Enzyme and pathway databases

BioCyciCJEJ192222:GJTS-852-MONOMER.

Family and domain databases

Gene3Di1.10.287.10. 1 hit.
HAMAPiMF_01343_B. Ribosomal_S15_B.
InterProiIPR000589. Ribosomal_S15.
IPR005290. Ribosomal_S15_bac-type.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]
PfamiPF00312. Ribosomal_S15. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
TIGRFAMsiTIGR00952. S15_bact. 1 hit.
PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCTC 11168.

Entry informationi

Entry nameiRS15_CAMJE
AccessioniPrimary (citable) accession number: Q0PA13
Secondary accession number(s): P49392, Q9PP46
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 2007
Last sequence update: September 19, 2006
Last modified: May 27, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.