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Q0PA13

- RS15_CAMJE

UniProt

Q0PA13 - RS15_CAMJE

Protein

30S ribosomal protein S15

Gene

rpsO

Organism
Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.UniRule annotation
    Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciCJEJ192222:GJTS-852-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S15UniRule annotation
    Gene namesi
    Name:rpsOUniRule annotation
    Ordered Locus Names:Cj0884
    OrganismiCampylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
    Taxonomic identifieri192222 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
    ProteomesiUP000000799: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 909030S ribosomal protein S15PRO_0000115407Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.UniRule annotation

    Protein-protein interaction databases

    IntActiQ0PA13. 20 interactions.
    MINTiMINT-6484910.
    STRINGi192222.Cj0884.

    Structurei

    Secondary structure

    1
    90
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi5 – 1511
    Helixi25 – 5127
    Turni52 – 554
    Helixi56 – 7318
    Helixi75 – 8410

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4IYLX-ray2.36A1-90[»]
    ProteinModelPortaliQ0PA13.
    SMRiQ0PA13. Positions 2-88.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S15P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0184.
    HOGENOMiHOG000040097.
    KOiK02956.
    OMAiNKQDHHS.
    OrthoDBiEOG6B368J.

    Family and domain databases

    Gene3Di1.10.287.10. 1 hit.
    HAMAPiMF_01343_B. Ribosomal_S15_B.
    InterProiIPR000589. Ribosomal_S15.
    IPR005290. Ribosomal_S15_bac-type.
    IPR009068. S15_NS1_RNA-bd.
    [Graphical view]
    PfamiPF00312. Ribosomal_S15. 1 hit.
    [Graphical view]
    SUPFAMiSSF47060. SSF47060. 1 hit.
    TIGRFAMsiTIGR00952. S15_bact. 1 hit.
    PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0PA13-1 [UniParc]FASTAAdd to Basket

    « Hide

    MALDSAKKAE IVAKFAKKPG DTGSTEVQVA LLTARIAELT EHLKIYKKDF   50
    SSRLGLLKLV GQRKRLLSYL KRKDYNSYSK LITELNLRDK 90
    Length:90
    Mass (Da):10,226
    Last modified:September 19, 2006 - v1
    Checksum:i19A41B60BAB8180C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL111168 Genomic DNA. Translation: CAL35006.1.
    PIRiE81361.
    RefSeqiYP_002344284.1. NC_002163.1.

    Genome annotation databases

    EnsemblBacteriaiCAL35006; CAL35006; Cj0884.
    GeneIDi905176.
    KEGGicje:Cj0884.
    PATRICi20058710. VBICamJej33762_0869.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL111168 Genomic DNA. Translation: CAL35006.1 .
    PIRi E81361.
    RefSeqi YP_002344284.1. NC_002163.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4IYL X-ray 2.36 A 1-90 [» ]
    ProteinModelPortali Q0PA13.
    SMRi Q0PA13. Positions 2-88.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q0PA13. 20 interactions.
    MINTi MINT-6484910.
    STRINGi 192222.Cj0884.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAL35006 ; CAL35006 ; Cj0884 .
    GeneIDi 905176.
    KEGGi cje:Cj0884.
    PATRICi 20058710. VBICamJej33762_0869.

    Phylogenomic databases

    eggNOGi COG0184.
    HOGENOMi HOG000040097.
    KOi K02956.
    OMAi NKQDHHS.
    OrthoDBi EOG6B368J.

    Enzyme and pathway databases

    BioCyci CJEJ192222:GJTS-852-MONOMER.

    Family and domain databases

    Gene3Di 1.10.287.10. 1 hit.
    HAMAPi MF_01343_B. Ribosomal_S15_B.
    InterProi IPR000589. Ribosomal_S15.
    IPR005290. Ribosomal_S15_bac-type.
    IPR009068. S15_NS1_RNA-bd.
    [Graphical view ]
    Pfami PF00312. Ribosomal_S15. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47060. SSF47060. 1 hit.
    TIGRFAMsi TIGR00952. S15_bact. 1 hit.
    PROSITEi PS00362. RIBOSOMAL_S15. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NCTC 11168.

    Entry informationi

    Entry nameiRS15_CAMJE
    AccessioniPrimary (citable) accession number: Q0PA13
    Secondary accession number(s): P49392, Q9PP46
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 1, 2007
    Last sequence update: September 19, 2006
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3