Reviewed, UniProtKB/Swiss-Prot Q0PA13 (RS15_CAMJE)

Names and origin

Protein names

Recommended name:
    30S ribosomal protein S15

Gene names

Name:	rpsO
Ordered Locus Names:	Cj0884

Organism

Campylobacter jejuni [Complete proteome] [HAMAP]

Taxonomic identifier

197 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Campylobacter

Protein attributes

Sequence length	90 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA By similarity. Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome By similarity.
Subunit structure	Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA By similarity.
Sequence similarities	Belongs to the ribosomal protein S15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	protein binding Inferred from physical interaction. Source: IntAct rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
fliA	Q0PC72	1	EBI-1191416,EBI-1191279
fliG	Q0PBJ0	1	EBI-1191416,EBI-1191336

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 90	90	30S ribosomal protein S15 HAMAP MF_01343		PRO_0000115407

Sequences

	Sequence		Length	Mass (Da)
	Q0PA13-1 [UniParc]. Last modified September 19, 2006. Version 1. Checksum: 19A41B60BAB8180C	FASTA	90	10,226
	10 20 30 40 50 60 MALDSAKKAE IVAKFAKKPG DTGSTEVQVA LLTARIAELT EHLKIYKKDF SSRLGLLKLV 70 80 90 GQRKRLLSYL KRKDYNSYSK LITELNLRDK

References

[1]

"The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences." Parkhill J., Wren B.W., Mungall K.L., Ketley J.M., Churcher C.M., Basham D., Chillingworth T., Davies R.M., Feltwell T., Holroyd S., Jagels K., Karlyshev A.V., Moule S., Pallen M.J., Penn C.W., Quail M.A., Rajandream M.A., Rutherford K.M. , van Vliet A.H.M., Whitehead S., Barrell B.G. Nature 403:665-668(2000) [PubMed: 10688204] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCTC 11168 / Serotype O:2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AL111168 Genomic DNA. Translation: CAL35006.1.
PIR	E81361.
RefSeq	YP_002344284.1.
3D structure databases
HSSP	HSSP built from PDB template 1AB3 based on UniProtKB P80378.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q0PA13. 20 interactions.
Genome annotation databases
GeneID	905176.
GenomeReviews	Gene locus Cj0884 in contig AL111168_GR.
KEGG	cje:Cj0884.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q0PA13.
OMA	Q0PA13. YLRNKDV.
Family and domain databases
HAMAP	MF_01343. [Tree]
InterPro	IPR000589. Ribosomal_S15. IPR005290. Ribosomal_S15_bac-type. IPR009068. S15_NS1_RNA_bd. [Graphical view]
Gene3D	G3DSA:1.10.287.10. S15_NS1_RNA_bd. 1 hit.
PANTHER	PTHR23321:SF10. Ribosom_S15_bac. 1 hit.
Pfam	PF00312. Ribosomal_S15. 1 hit. [Graphical view]
ProDom	PD157043. Ribosomal_S15_b. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00952. S15_bact. 1 hit.
PROSITE	PS00362. RIBOSOMAL_S15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS15_CAMJE

Accession

Primary (citable) accession number: Q0PA13
Secondary accession number(s): P49392, Q9PP46

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 1, 2007
Last sequence update:	September 19, 2006
Last modified:	June 16, 2009
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)