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Protein
Submitted name:

Core protein vp8

Gene

VARV_JAP46_yam_080

Organism
Variola virus (isolate Human/Japan/Yamada MS-2(A)/1946) (VARV) (Smallpox virus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Core protein vp8Imported
Gene namesi
ORF Names:VARV_JAP46_yam_080Imported
OrganismiVariola virus (isolate Human/Japan/Yamada MS-2(A)/1946) (VARV) (Smallpox virus)Imported
Taxonomic identifieri587202 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePoxviridaeChordopoxvirinaeOrthopoxvirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000006909 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Family & Domainsi

Family and domain databases

InterProiView protein in InterPro
IPR007586. VP8_pox_nuc-bd.
PfamiView protein in Pfam
PF04498. Pox_VP8_L4R. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD011473. VP8_pox_nuc_bd. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0NG62-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLLLENLIE EDTIFFAGSI SEYDDLQMVI AGAKSKFPRS MLSIFNIVPR
60 70 80 90 100
TMSKYELELI HNENITGAMF TTMYNIRNNL GLGDDKLTIE AIENYFLDPN
110 120 130 140 150
NEVMPLIINN TDMTAVIPKK SGRRKNKNMV IFRQGSSPIL CIFETRKKIN
160 170 180 190 200
IYKENMESAS TEYTPIGDNK ALISKYAGIN VLNVYSPSTS MRLNAIYGFT
210 220 230 240 250
NKNKLEKLST NKELESYSSS PLQEPIRLND FLGLLECVKK NIPLTDIPTK

D
Length:251
Mass (Da):28,461
Last modified:March 24, 2009 - v1
Checksum:iBA34200CFBC045B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ441429 Genomic DNA. Translation: ABF25451.1.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ0NG62_VAR46
AccessioniPrimary (citable) accession number: Q0NG62
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: April 29, 2015
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported