Q0KDF7 (Q0KDF7_CUPNH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase small subunit HAMAP-Rule MF_01202
EC=1.4.99.1 HAMAP-Rule MF_01202

Gene names

Name:	dadA1 EMBL CAJ91964.1
Synonyms:	dadA HAMAP-Rule MF_01202
Ordered Locus Names:	H16_A0817 EMBL CAJ91964.1

Organism

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) [Complete proteome] [HAMAP] EMBL CAJ91964.1

Taxonomic identifier

381666 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus › Cupriavidus necator

Protein attributes

Sequence length	434 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP-Rule MF_01202 SAAS SAAS006076
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP-Rule MF_01202 SAAS SAAS006076
Cofactor	FAD By similarity. HAMAP-Rule MF_01202 SAAS SAAS006076
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP-Rule MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity. HAMAP-Rule MF_01202 SAAS SAAS006076
Sequence similarities	Belongs to the DadA oxidoreductase family. HAMAP-Rule MF_01202

Ontologies

Keywords
Ligand	FAD HAMAP-Rule MF_01202 SAAS SAAS006076 Flavoprotein SAAS SAAS006076 HAMAP-Rule MF_01202
Molecular function	Oxidoreductase HAMAP-Rule MF_01202 SAAS SAAS006076 EMBL CAJ91964.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine catabolic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	3 – 17	15	FAD By similarity HAMAP-Rule MF_01202

Sequences

	Sequence		Length	Mass (Da)
	Q0KDF7 [UniParc]. Last modified October 3, 2006. Version 1. Checksum: A62E4118D2568AD8	FASTA	434	46,890
	10 20 30 40 50 60 MRVLVLGSGV IGVTSAWYLA KAGHEVTVVD REAGPALGTS FANAGQISPG YASPWAAPGV 70 80 90 100 110 120 PLKAIKWMFQ QHAPLSIRPD GTLFQLQWMW QMLQNCSAER YAVNKERMVR LAEYSRDCIR 130 140 150 160 170 180 ALRAETGIAY EGRQQGTLQV FRTDEQLQGA AKDIAVLEEA GVPYQLLSRE ELAASEPALA 190 200 210 220 230 240 AVRHKLAGGL RLPNDETGDC ALFTQRLAGM AELLGVKFLY NRSIDRLMTQ GDAVTGAVVD 250 260 270 280 290 300 GQPMDADLVV VALGSWSTQL VKPFLRGMSN LPVYPLKGFS ITVPLSDPSR SPVSTVLDET 310 320 330 340 350 360 YKVAITRFDD RIRVGGMAQI VGYDRSLDPA KRRTLEHVVT DLFPGAGDVS QAAFWTGLRP 370 380 390 400 410 420 MTPDGTPIVG PTQVRGLWLN TGHGTLGWTM ACGSGKLLSD LVSGTSPAIR ADDLSVGRYL 430 KPARHHLAPR PATA

References

[1]

"Genome sequence of the bioplastic-producing 'Knallgas' bacterium Ralstonia eutropha H16." Pohlmann A., Fricke W.F., Reinecke F., Kusian B., Liesegang H., Cramm R., Eitinger T., Ewering C., Poetter M., Schwartz E., Strittmatter A., Voss I., Gottschalk G., Steinbuechel A., Friedrich B., Bowien B. Nat. Biotechnol. 24:1257-1262(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17699 / H16 / DSM 428 / Stanier 337.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM260479 Genomic DNA. Translation: CAJ91964.1.
RefSeq	YP_725332.1. NC_008313.1.
3D structure databases
ProteinModelPortal	Q0KDF7.
ModBase	Search...
Protein-protein interaction databases
STRING	381666.H16_A0817.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAJ91964; CAJ91964; H16_A0817.
GeneID	4246916.
KEGG	reh:H16_A0817.
PATRIC	35231045. VBIRalEut6770_1190.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0665.
HOGENOM	HOG000217450.
KO	K00285.
OMA	LEHAGGQ.
ProtClustDB	PRK00711.
Enzyme and pathway databases
BioCyc	CNEC381666:GJUJ-816-MONOMER.
UniPathway	UPA00043; UER00498.
Family and domain databases
Gene3D	3.40.50.720. 3 hits.
HAMAP	MF_01202. DadA.
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0KDF7_CUPNH

Accession

Primary (citable) accession number: Q0KDF7

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2006
Last sequence update:	October 3, 2006
Last modified:	May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)