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Protein
Submitted name:

DNA polymerase III delta prime subunit

Gene

holB

Organism
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciCNEC381666:GJUJ-1567-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III delta prime subunitImported (EC:2.7.7.7Imported)
Gene namesi
Name:holBImported
Ordered Locus Names:H16_A1570Imported
OrganismiCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)Imported
Taxonomic identifieri381666 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000008210 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi381666.H16_A1570.

Structurei

3D structure databases

ProteinModelPortaliQ0KBB9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0470.
HOGENOMiHOG000192592.
KOiK02341.
OMAiQRGHAWL.
OrthoDBiEOG6W9X5M.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0KBB9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLYPWQKEDW QRLGALRERL PHALLIHGQQ GIGKRDLALH FAQGLLCEAP
60 70 80 90 100
LPDGQPCGQC AACHWFSQGN HPDFTVVRPE ALDAAAEAET DEGGKKKAPS
110 120 130 140 150
KIIRMEQVRA LIEAVGVGTH RAGLRVVVVY PLDALQTEGA NALLKTLEEP
160 170 180 190 200
PPSTVFLLVT DRLDRILPTI LSRCRQFSAQ RPTPEAALAW LRGQGVADAE
210 220 230 240 250
AQLALAGGSP LTALHAAEAE EQPLQRWLVG QLGAAAAFDA SAAAEQLQKL
260 270 280 290 300
PVPAVLGILQ RWTYDLLTLR LDGSATPRYL PKERAVLARC AGATDAHRLQ
310 320 330
AFATRLTAHR RSENHPLAAR LVMEAVFLEY RQLFR
Length:335
Mass (Da):36,651
Last modified:October 3, 2006 - v1
Checksum:i5AF8BB9282AE08DE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM260479 Genomic DNA. Translation: CAJ92702.1.
RefSeqiWP_010810002.1. NC_008313.1.

Genome annotation databases

EnsemblBacteriaiCAJ92702; CAJ92702; H16_A1570.
GeneIDi4250460.
KEGGireh:H16_A1570.
PATRICi35232605. VBIRalEut6770_1956.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM260479 Genomic DNA. Translation: CAJ92702.1.
RefSeqiWP_010810002.1. NC_008313.1.

3D structure databases

ProteinModelPortaliQ0KBB9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi381666.H16_A1570.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ92702; CAJ92702; H16_A1570.
GeneIDi4250460.
KEGGireh:H16_A1570.
PATRICi35232605. VBIRalEut6770_1956.

Phylogenomic databases

eggNOGiCOG0470.
HOGENOMiHOG000192592.
KOiK02341.
OMAiQRGHAWL.
OrthoDBiEOG6W9X5M.

Enzyme and pathway databases

BioCyciCNEC381666:GJUJ-1567-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17699 / H16 / DSM 428 / Stanier 337Imported.

Entry informationi

Entry nameiQ0KBB9_CUPNH
AccessioniPrimary (citable) accession number: Q0KBB9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: July 22, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.