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Q0KBB9

- Q0KBB9_CUPNH

UniProt

Q0KBB9 - Q0KBB9_CUPNH

Protein
Submitted name:

DNA polymerase III delta prime subunit

Gene

holB

Organism
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (03 Oct 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 3'-5' exonuclease activity Source: InterPro
    2. DNA-directed DNA polymerase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    NucleotidyltransferaseImported, Transferase

    Enzyme and pathway databases

    BioCyciCNEC381666:GJUJ-1567-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase III delta prime subunitImported (EC:2.7.7.7Imported)
    Gene namesi
    Name:holBImported
    Ordered Locus Names:H16_A1570Imported
    OrganismiCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)Imported
    Taxonomic identifieri381666 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
    ProteomesiUP000008210: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi381666.H16_A1570.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0KBB9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0470.
    HOGENOMiHOG000192592.
    KOiK02341.
    OMAiFAQGNHP.
    OrthoDBiEOG6W9X5M.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR004622. DNA_pol_HolB.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00678. holB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q0KBB9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLYPWQKEDW QRLGALRERL PHALLIHGQQ GIGKRDLALH FAQGLLCEAP    50
    LPDGQPCGQC AACHWFSQGN HPDFTVVRPE ALDAAAEAET DEGGKKKAPS 100
    KIIRMEQVRA LIEAVGVGTH RAGLRVVVVY PLDALQTEGA NALLKTLEEP 150
    PPSTVFLLVT DRLDRILPTI LSRCRQFSAQ RPTPEAALAW LRGQGVADAE 200
    AQLALAGGSP LTALHAAEAE EQPLQRWLVG QLGAAAAFDA SAAAEQLQKL 250
    PVPAVLGILQ RWTYDLLTLR LDGSATPRYL PKERAVLARC AGATDAHRLQ 300
    AFATRLTAHR RSENHPLAAR LVMEAVFLEY RQLFR 335
    Length:335
    Mass (Da):36,651
    Last modified:October 3, 2006 - v1
    Checksum:i5AF8BB9282AE08DE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM260479 Genomic DNA. Translation: CAJ92702.1.
    RefSeqiYP_726070.1. NC_008313.1.

    Genome annotation databases

    EnsemblBacteriaiCAJ92702; CAJ92702; H16_A1570.
    GeneIDi4250460.
    KEGGireh:H16_A1570.
    PATRICi35232605. VBIRalEut6770_1956.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM260479 Genomic DNA. Translation: CAJ92702.1 .
    RefSeqi YP_726070.1. NC_008313.1.

    3D structure databases

    ProteinModelPortali Q0KBB9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 381666.H16_A1570.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAJ92702 ; CAJ92702 ; H16_A1570 .
    GeneIDi 4250460.
    KEGGi reh:H16_A1570.
    PATRICi 35232605. VBIRalEut6770_1956.

    Phylogenomic databases

    eggNOGi COG0470.
    HOGENOMi HOG000192592.
    KOi K02341.
    OMAi FAQGNHP.
    OrthoDBi EOG6W9X5M.

    Enzyme and pathway databases

    BioCyci CNEC381666:GJUJ-1567-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR004622. DNA_pol_HolB.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00678. holB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17699 / H16 / DSM 428 / Stanier 337Imported.

    Entry informationi

    Entry nameiQ0KBB9_CUPNH
    AccessioniPrimary (citable) accession number: Q0KBB9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2006
    Last sequence update: October 3, 2006
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3