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Q0KBB9

- Q0KBB9_CUPNH

UniProt

Q0KBB9 - Q0KBB9_CUPNH

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Protein
Submitted name: DNA polymerase III delta prime subunit
Gene
holB, H16_A1570
Organism
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. 3'-5' exonuclease activity Source: InterPro
  2. DNA-directed DNA polymerase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciCNEC381666:GJUJ-1567-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III delta prime subunitImported (EC:2.7.7.7Imported)
Gene namesi
Name:holBImported
Ordered Locus Names:H16_A1570Imported
OrganismiCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)Imported
Taxonomic identifieri381666 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000008210: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi381666.H16_A1570.

Structurei

3D structure databases

ProteinModelPortaliQ0KBB9.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0470.
HOGENOMiHOG000192592.
KOiK02341.
OMAiFAQGNHP.
OrthoDBiEOG6W9X5M.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0KBB9-1 [UniParc]FASTAAdd to Basket

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MLYPWQKEDW QRLGALRERL PHALLIHGQQ GIGKRDLALH FAQGLLCEAP    50
LPDGQPCGQC AACHWFSQGN HPDFTVVRPE ALDAAAEAET DEGGKKKAPS 100
KIIRMEQVRA LIEAVGVGTH RAGLRVVVVY PLDALQTEGA NALLKTLEEP 150
PPSTVFLLVT DRLDRILPTI LSRCRQFSAQ RPTPEAALAW LRGQGVADAE 200
AQLALAGGSP LTALHAAEAE EQPLQRWLVG QLGAAAAFDA SAAAEQLQKL 250
PVPAVLGILQ RWTYDLLTLR LDGSATPRYL PKERAVLARC AGATDAHRLQ 300
AFATRLTAHR RSENHPLAAR LVMEAVFLEY RQLFR 335
Length:335
Mass (Da):36,651
Last modified:October 3, 2006 - v1
Checksum:i5AF8BB9282AE08DE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM260479 Genomic DNA. Translation: CAJ92702.1.
RefSeqiYP_726070.1. NC_008313.1.

Genome annotation databases

EnsemblBacteriaiCAJ92702; CAJ92702; H16_A1570.
GeneIDi4250460.
KEGGireh:H16_A1570.
PATRICi35232605. VBIRalEut6770_1956.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM260479 Genomic DNA. Translation: CAJ92702.1 .
RefSeqi YP_726070.1. NC_008313.1.

3D structure databases

ProteinModelPortali Q0KBB9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 381666.H16_A1570.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAJ92702 ; CAJ92702 ; H16_A1570 .
GeneIDi 4250460.
KEGGi reh:H16_A1570.
PATRICi 35232605. VBIRalEut6770_1956.

Phylogenomic databases

eggNOGi COG0470.
HOGENOMi HOG000192592.
KOi K02341.
OMAi FAQGNHP.
OrthoDBi EOG6W9X5M.

Enzyme and pathway databases

BioCyci CNEC381666:GJUJ-1567-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00678. holB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17699 / H16 / DSM 428 / Stanier 337.

Entry informationi

Entry nameiQ0KBB9_CUPNH
AccessioniPrimary (citable) accession number: Q0KBB9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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