Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Fragment of ATP-dependent DNA ligase

Gene

H16_B2393

Organism
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCNEC381666:GJUJ-6093-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Fragment of ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:H16_B2393Imported
OrganismiCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)Imported
Taxonomic identifieri381666 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000008210 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi381666.H16_B2393.

Structurei

3D structure databases

ProteinModelPortaliQ0JYJ9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
OMAiQLHERAM.
OrthoDBiEOG6C8N2P.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0JYJ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRARARRKGW YKRADLVAHC VFDLLVGKGE DLCGQPIERR KSALRRLLAD
60 70 80 90 100
SPAGILYVDS IEDGAWLYGH VLTLGLEGVV GKRAGSLYRD GERSPDWMKI
110
KRPGAVPFKR FRR
Length:113
Mass (Da):12,824
Last modified:October 3, 2006 - v1
Checksum:iD1B0C9D7F78C57FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM260480 Genomic DNA. Translation: CAJ97175.1.

Genome annotation databases

EnsemblBacteriaiCAJ97175; CAJ97175; H16_B2393.
KEGGireh:H16_B2393.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM260480 Genomic DNA. Translation: CAJ97175.1.

3D structure databases

ProteinModelPortaliQ0JYJ9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi381666.H16_B2393.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ97175; CAJ97175; H16_B2393.
KEGGireh:H16_B2393.

Phylogenomic databases

eggNOGiCOG1793.
OMAiQLHERAM.
OrthoDBiEOG6C8N2P.

Enzyme and pathway databases

BioCyciCNEC381666:GJUJ-6093-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17699 / H16 / DSM 428 / Stanier 337Imported.

Entry informationi

Entry nameiQ0JYJ9_CUPNH
AccessioniPrimary (citable) accession number: Q0JYJ9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: July 22, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.