Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q0JMD4 (P2C03_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 3

Short name=OsPP2C03
EC=3.1.3.16
Gene names
Ordered Locus Names:Os01g0513100, LOC_Os01g32964
ORF Names:OsJ_001929, OSJNBa0054L14.32, P0504D03.18
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length485 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Sequence caution

The sequence BAD73079.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAD73271.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAF05094.2 differs from that shown. Reason: Erroneous gene model prediction.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 485485Probable protein phosphatase 2C 3
PRO_0000363249

Regions

Domain96 – 346251PP2C-like
Compositional bias14 – 185Poly-His
Compositional bias63 – 686Poly-Gly
Compositional bias451 – 4555Poly-Ser

Sites

Metal binding1291Manganese 1 By similarity
Metal binding1291Manganese 2 By similarity
Metal binding1301Manganese 1; via carbonyl oxygen By similarity
Metal binding3051Manganese 2 By similarity
Metal binding3441Manganese 2 By similarity

Experimental info

Sequence conflict3501V → A in AK059183. Ref.5

Sequences

Sequence LengthMass (Da)Tools
Q0JMD4 [UniParc].

Last modified February 10, 2009. Version 2.
Checksum: CFA42E401AB047A1

FASTA48551,616
        10         20         30         40         50         60 
MSSPSPSSEA AAAHHHHHQR RQHAGAAGGS GLVPLAALIK EEARAERPMG SGSRICARDE 

        70         80         90        100        110        120 
EDGGGGGGAE GGRRWRRPLL RYGCAAQSKK GEDFFLLRTD CARPSTSSSS SSSLASSPPH 

       130        140        150        160        170        180 
TFAVFAVLDG HNGNAAAIYT RDNLLNHVLS AMPRGLSREE WLHALPRALV AGFVKTDKEF 

       190        200        210        220        230        240 
QHKGQTSGTT ATFVIIDGWT ITVASVGDSR CILDAQGGAV SLLTVDHRLE ENVEERERVT 

       250        260        270        280        290        300 
ASGGEVGRLS VVGGAEIGPL RCWPGGLCLS RSIGDIDVGE FIVPVPYVKQ VKLSNAGGRL 

       310        320        330        340        350        360 
IIASDGIWDA LSSEAAAKCC RGLPAELAAK QVVKEALRTR GLKDDTTCIV VDMIPPDQTI 

       370        380        390        400        410        420 
RHPSPPKKIN KLKSLIFRKK TKDHPNKLTK QLSAAGMVEE LFEEGSAMLS ERLGNDSSGR 

       430        440        450        460        470        480 
RTSSSLFTCA ICQVDLEPSE GISVHAGSIF SSSSSKPWEG PFLCSDCRDK KDAMEGKRPS 


GVKVL 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence and structure of rice chromosome 1."
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. expand/collapse author list , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[5]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 334-485.
Strain: cv. Nipponbare.
[6]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP002970 Genomic DNA. Translation: BAD73079.1. Sequence problems.
AP003213 Genomic DNA. Translation: BAD73271.1. Sequence problems.
AP008207 Genomic DNA. Translation: BAF05094.2. Sequence problems.
CM000138 Genomic DNA. No translation available.
AK059183 mRNA. No translation available.
RefSeqNP_001043180.2. NM_001049715.1.
UniGeneOs.37337.

3D structure databases

ProteinModelPortalQ0JMD4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4323983.
KEGGosa:4323983.

Organism-specific databases

GrameneQ0JMD4.

Phylogenomic databases

eggNOGCOG0631.
HOGENOMHOG000240114.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 1 hit.
ProtoNetSearch...

Entry information

Entry nameP2C03_ORYSJ
AccessionPrimary (citable) accession number: Q0JMD4
Secondary accession number(s): A2ZTQ7, Q5QMT7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 10, 2009
Last modified: April 16, 2014
This is version 48 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations