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Q0JLP9

- P2C06_ORYSJ

UniProt

Q0JLP9 - P2C06_ORYSJ

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Protein

Probable protein phosphatase 2C 6

Gene

Os01g0583100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi205 – 2051Manganese 1By similarity
Metal bindingi205 – 2051Manganese 2By similarity
Metal bindingi206 – 2061Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi386 – 3861Manganese 2By similarity
Metal bindingi448 – 4481Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein serine/threonine phosphatase activity Source: InterPro

GO - Biological processi

  1. protein dephosphorylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 6 (EC:3.1.3.16)
Short name:
OsPP2C06
Gene namesi
Ordered Locus Names:Os01g0583100, LOC_Os01g40094
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 1

Organism-specific databases

GrameneiQ0JLP9.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 467467Probable protein phosphatase 2C 6PRO_0000363252Add
BLAST

Proteomic databases

PRIDEiQ0JLP9.

Expressioni

Gene expression databases

ExpressionAtlasiQ0JLP9. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ0JLP9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini148 – 450303PP2C-likeAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi5 – 138134Ala-richAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PP2C-like domain.Curated

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000233896.
InParanoidiQ0JLP9.
KOiK14497.
OMAiQRGSKDN.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PP2C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0JLP9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEDVAVAAAL APAPATAPVF SPAAAGLTLI AAAAADPIAA VVAGAMDGVV
60 70 80 90 100
TVPPVRTASA VEDDAVAPGR GEEGGEASAV GSPCSVTSDC SSVASADFEG
110 120 130 140 150
VGLGFFGAAA DGGAAMVFED SAASAATVEA EARVAAGARS VFAVECVPLW
160 170 180 190 200
GHKSICGRRP EMEDAVVAVS RFFDIPLWML TGNSVVDGLD PMSFRLPAHF
210 220 230 240 250
FGVYDGHGGA QVANYCRERL HAALVEELSR IEGSVSGANL GSVEFKKKWE
260 270 280 290 300
QAFVDCFSRV DEEVGGNASR GEAVAPETVG STAVVAVICS SHIIVANCGD
310 320 330 340 350
SRAVLCRGKQ PVPLSVDHKP NREDEYARIE AEGGKVIQWN GYRVFGVLAM
360 370 380 390 400
SRSIGDRYLK PWIIPVPEIT IVPRAKDDEC LVLASDGLWD VMSNEEVCDV
410 420 430 440 450
ARKRILLWHK KNGTNPASAP RSGDSSDPAA EAAAECLSKL ALQKGSKDNI
460
SVIVVDLKAH RKFKSKS
Length:467
Mass (Da):48,635
Last modified:October 3, 2006 - v1
Checksum:i50CB687EAB641C5B
GO

Sequence cautioni

The sequence BAF05329.2 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008207 Genomic DNA. Translation: BAF05329.2. Sequence problems.
AK242616 mRNA. No translation available.
RefSeqiNP_001043415.2. NM_001049950.2.
UniGeneiOs.5367.

Genome annotation databases

GeneIDi4324201.
KEGGiosa:4324201.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008207 Genomic DNA. Translation: BAF05329.2 . Sequence problems.
AK242616 mRNA. No translation available.
RefSeqi NP_001043415.2. NM_001049950.2.
UniGenei Os.5367.

3D structure databases

ProteinModelPortali Q0JLP9.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q0JLP9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4324201.
KEGGi osa:4324201.

Organism-specific databases

Gramenei Q0JLP9.

Phylogenomic databases

eggNOGi COG0631.
HOGENOMi HOG000233896.
InParanoidi Q0JLP9.
KOi K14497.
OMAi QRGSKDN.

Gene expression databases

ExpressionAtlasi Q0JLP9. baseline.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 1 hit.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 1 hit.
PROSITEi PS01032. PP2C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Oryza sativa full length cDNA."
    The rice full-length cDNA consortium
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 72-467.
    Strain: cv. Nipponbare.
  4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C06_ORYSJ
AccessioniPrimary (citable) accession number: Q0JLP9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: October 3, 2006
Last modified: October 29, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3