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Q0JLP9 (P2C06_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 6
Short name=OsPP2C06
EC=3.1.3.16
Gene names
Ordered Locus Names:Os01g0583100, LOC_Os01g40094
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza ›

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

A phosphoprotein + H2O = a protein + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Sequence caution

The sequence BAF05329.2 differs from that shown. Reason: Erroneous gene model prediction.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 467467Probable protein phosphatase 2C 6
PRO_0000363252

Regions

Domain148 – 450303PP2C-like
Compositional bias5 – 138134Ala-rich

Sites

Metal binding2051Manganese 1 By similarity
Metal binding2051Manganese 2 By similarity
Metal binding2061Manganese 1; via carbonyl oxygen By similarity
Metal binding3861Manganese 2 By similarity
Metal binding4481Manganese 2 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q0JLP9 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 50CB687EAB641C5B

FASTA46748,635
        10         20         30         40         50         60 
MEDVAVAAAL APAPATAPVF SPAAAGLTLI AAAAADPIAA VVAGAMDGVV TVPPVRTASA 

        70         80         90        100        110        120 
VEDDAVAPGR GEEGGEASAV GSPCSVTSDC SSVASADFEG VGLGFFGAAA DGGAAMVFED 

       130        140        150        160        170        180 
SAASAATVEA EARVAAGARS VFAVECVPLW GHKSICGRRP EMEDAVVAVS RFFDIPLWML 

       190        200        210        220        230        240 
TGNSVVDGLD PMSFRLPAHF FGVYDGHGGA QVANYCRERL HAALVEELSR IEGSVSGANL 

       250        260        270        280        290        300 
GSVEFKKKWE QAFVDCFSRV DEEVGGNASR GEAVAPETVG STAVVAVICS SHIIVANCGD 

       310        320        330        340        350        360 
SRAVLCRGKQ PVPLSVDHKP NREDEYARIE AEGGKVIQWN GYRVFGVLAM SRSIGDRYLK 

       370        380        390        400        410        420 
PWIIPVPEIT IVPRAKDDEC LVLASDGLWD VMSNEEVCDV ARKRILLWHK KNGTNPASAP 

       430        440        450        460 
RSGDSSDPAA EAAAECLSKL ALQKGSKDNI SVIVVDLKAH RKFKSKS

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"Oryza sativa full length cDNA."
The rice full-length cDNA consortium
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 72-467.
Strain: cv. Nipponbare.
[4]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008207 Genomic DNA. Translation: BAF05329.2. Sequence problems.
AK242616 mRNA. No translation available.
RefSeqNP_001043415.2. NM_001049950.2.
UniGeneOs.5367.

3D structure databases

ProteinModelPortalQ0JLP9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsLOC_Os01g40094.1; LOC_Os01g40094.1; LOC_Os01g40094.
GeneID4324201.
KEGGosa:4324201.

Organism-specific databases

GrameneQ0JLP9.

Phylogenomic databases

eggNOGCOG0631.
HOGENOMHOG000233896.
KOK14497.
OMAQRGSKDN.
ProtClustDBCLSN2691529.

Gene expression databases

ArrayExpressQ0JLP9.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. PP2C-related. 1 hit.
PROSITEPS01032. PP2C. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP2C06_ORYSJ
AccessionPrimary (citable) accession number: Q0JLP9
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: October 3, 2006
Last modified: April 3, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

SIMILARITY comments

Index of protein domains and families

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