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Q0JJD4

- MAN2_ORYSJ

UniProt

Q0JJD4 - MAN2_ORYSJ

Protein

Mannan endo-1,4-beta-mannosidase 2

Gene

MAN2

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 2 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei227 – 2271Proton donorBy similarity
    Active sitei349 – 3491NucleophileBy similarity

    GO - Molecular functioni

    1. mannan endo-1,4-beta-mannosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro
    2. seed germination Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH5. Glycoside Hydrolase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Mannan endo-1,4-beta-mannosidase 2 (EC:3.2.1.78)
    Alternative name(s):
    Beta-mannanase 2
    Endo-beta-1,4-mannanase 2
    OsMAN2
    Gene namesi
    Name:MAN2
    Ordered Locus Names:Os01g0746700, LOC_Os01g54300
    ORF Names:OSJNBa0014K08.42, P0481E12.1
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 1

    Organism-specific databases

    GrameneiQ0JJD4.

    Subcellular locationi

    Secreted Curated

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727Sequence AnalysisAdd
    BLAST
    Chaini28 – 445418Mannan endo-1,4-beta-mannosidase 2PRO_0000277483Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi181 – 1811N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Expressioni

    Tissue specificityi

    Expressed in stems and seeds, and at lower levels in roots and leaves.1 Publication

    Structurei

    3D structure databases

    ProteinModelPortaliQ0JJD4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG3934.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001547. Glyco_hydro_5.
    IPR018087. Glyco_hydro_5_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF00150. Cellulase. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00659. GLYCOSYL_HYDROL_F5. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q0JJD4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVGNGLILY HILGLASCIA LVYFSLGEVD LRDALPSLPF SGGASRAAAA    50
    SLPFVERRGK RLFLDGRPFY INGWNSYWLM DLAVEPNTRP RVSSMFRTAV 100
    SMGLTVCRTW AFNDGSYNAL QLSPGHFDER VFKALDRVVA EASEHGVRLI 150
    LSLANNLDAY GGKRQYVRWA WEEGVGLTAS NDSFFFDPAI RDYFKVYLKT 200
    LLMRKNHLTG LEYRDDPTIL AWELMNEPRC TSDPSGDTLQ RWMEEMSAYV 250
    KSIDKKHLLT VGTEGFYGPT SSQEKLNINP GEWFPNNYGA DFIRNSKIQD 300
    IDFASVHVYP DNWLQHASLD EKLKFMTRWI TAHVEDGDGE LEKPVLVTEF 350
    GLSHQVEGFE DAHRDVLYRA VYDIVHGSAR RGGAAGGALV WQLAAEGMEE 400
    YHDGFSIVPS ERPSMMRLIK EQSCRLAAVR YGEEGARKVL KTVCA 445
    Length:445
    Mass (Da):50,063
    Last modified:February 6, 2007 - v2
    Checksum:iC7A62692B7597FC9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003076 Genomic DNA. Translation: BAB56016.1.
    AP003376 Genomic DNA. Translation: BAC05600.1.
    AP008207 Genomic DNA. Translation: BAF06144.2.
    RefSeqiNP_001044230.2. NM_001050765.2.
    UniGeneiOs.2123.

    Genome annotation databases

    EnsemblPlantsiOS01T0746700-00; OS01T0746700-00; OS01G0746700.
    GeneIDi4326178.
    KEGGiosa:4326178.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003076 Genomic DNA. Translation: BAB56016.1 .
    AP003376 Genomic DNA. Translation: BAC05600.1 .
    AP008207 Genomic DNA. Translation: BAF06144.2 .
    RefSeqi NP_001044230.2. NM_001050765.2.
    UniGenei Os.2123.

    3D structure databases

    ProteinModelPortali Q0JJD4.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH5. Glycoside Hydrolase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS01T0746700-00 ; OS01T0746700-00 ; OS01G0746700 .
    GeneIDi 4326178.
    KEGGi osa:4326178.

    Organism-specific databases

    Gramenei Q0JJD4.

    Phylogenomic databases

    eggNOGi COG3934.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001547. Glyco_hydro_5.
    IPR018087. Glyco_hydro_5_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF00150. Cellulase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00659. GLYCOSYL_HYDROL_F5. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence and structure of rice chromosome 1."
      Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
      , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
      Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar."
      Yuan J.S., Yang X., Lai J., Lin H., Cheng Z.-M., Nonogaki H., Chen F.
      Funct. Integr. Genomics 7:1-16(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiMAN2_ORYSJ
    AccessioniPrimary (citable) accession number: Q0JJD4
    Secondary accession number(s): Q94J47
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 58 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3