Reviewed,
UniProtKB/Swiss-Prot Q0JHP8 (LAC8_ORYSJ)
Last modified
November 25, 2008.
Version 21.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Laccase-8 EC=1.10.3.2 Alternative name(s): Benzenediol:oxygen oxidoreductase 8 Urishiol oxidase 8 Diphenol oxidase 8 | ||||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) | ||||||
| Taxonomic identifier | 39947 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 554 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | Lignin degradation and detoxification of lignin-derived products By similarity. |
| Catalytic activity | 4 benzenediol + O(2) = 4 benzosemiquinone + 2 H(2)O. |
| Cofactor | Binds 4 copper ions per monomer By similarity. |
| Subcellular location | Secreted › extracellular space › apoplastPotential. |
| Sequence similarities | Belongs to the multicopper oxidase family. Contains 3 plastocyanin-like domains. |
| Sequence caution | The sequence BAD82649.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence BAF06730.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
Keywords | |
|---|---|
| Biological process | Lignin degradation |
| Cellular component | Apoplast Secreted |
| Domain | Repeat Signal |
| Ligand | Copper Metal-binding |
| Molecular function | Oxidoreductase |
| PTM | Glycoprotein |
Gene Ontology (GO) | |
| Biological process | lignin catabolic process Inferred from electronic annotation. Source: UniProtKB-KW oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | apoplast Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | copper ion binding Inferred from electronic annotation. Source: InterPro laccase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 21 | 21 | Potential | ||||||
| Chain | 22 – 554 | 533 | Laccase-8 | PRO_0000291893 | |||||
Regions | |||||||||
| Domain | 29 – 145 | 117 | Plastocyanin-like 1 | ||||||
| Domain | 156 – 309 | 154 | Plastocyanin-like 2 | ||||||
| Domain | 411 – 537 | 127 | Plastocyanin-like 3 | ||||||
Sites | |||||||||
| Metal binding | 79 | 1 | Copper 1 By similarity | ||||||
| Metal binding | 81 | 1 | Copper 2 By similarity | ||||||
| Metal binding | 124 | 1 | Copper 2 By similarity | ||||||
| Metal binding | 126 | 1 | Copper 3 By similarity | ||||||
| Metal binding | 455 | 1 | Copper 4 By similarity | ||||||
| Metal binding | 458 | 1 | Copper 1 By similarity | ||||||
| Metal binding | 460 | 1 | Copper 3 By similarity | ||||||
| Metal binding | 516 | 1 | Copper 3 By similarity | ||||||
| Metal binding | 517 | 1 | Copper 4 By similarity | ||||||
| Metal binding | 518 | 1 | Copper 2 By similarity | ||||||
| Metal binding | 522 | 1 | Copper 4 By similarity | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 107 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 113 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 271 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 369 | 1 | N-linked (GlcNAc...) Potential | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The genome sequence and structure of rice chromosome 1." Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. Gojobori T.Nature 420:312-316(2002) [PubMed: 12447438] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [2] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [3] | "Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare. |
Cross-references
Sequence databases | |
|---|---|
| AP004072 Genomic DNA. Translation: BAD82649.1. Sequence problems. AP008207 Genomic DNA. Translation: BAF06730.1. Sequence problems. | |
| RefSeq | NP_001044816.1. |
| UniGene | Os.91169 |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 4324803. |
| KEGG | osa:4324803. |
| NMPDR | fig|39947.1.peg.7578. |
Organism-specific databases | |
| Gramene | Q5N7A2. |
Family and domain databases | |
| InterPro | IPR001117. Cu-oxidase. IPR011707. Cu-oxidase_3. IPR002355. Cu_oxidase_Cu_BS. IPR008972. Cupredoxin. IPR017761. Laccase. [Graphical view] |
| Gene3D | G3DSA:2.60.40.420. Cupredoxin. 1 hit. |
| Pfam | PF00394. Cu-oxidase. 1 hit. PF07732. Cu-oxidase_3. 1 hit. [Graphical view] |
| PROSITE | PS00079. MULTICOPPER_OXIDASE1. False negative. PS00080. MULTICOPPER_OXIDASE2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | LAC8_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q0JHP8 Secondary accession number(s): Q5N7A2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| SIMILARITY comments Index of protein domains and families |

Clusters with


