Reviewed,
UniProtKB/Swiss-Prot Q0JHF8 (F16P2_ORYSJ)
Last modified
January 19, 2010.
Version 30.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Fructose-1,6-bisphosphatase, cytosolic Short name=FBPase EC=3.1.3.11 Alternative name(s): D-fructose-1,6-bisphosphate 1-phosphohydrolase | ||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) | ||||
| Taxonomic identifier | 39947 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 339 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate. |
| Cofactor | Binds 3 magnesium ions per subunit By similarity. |
| Subcellular location | |
| Miscellaneous | In plants there are two FBPase isozymes: one in the cytosol and the other in the chloroplast. |
| Sequence similarities | Belongs to the FBPase class 1 family. |
| Sequence caution | The sequence BAF06820.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism |
| Cellular component | Cytoplasm |
| Ligand | Magnesium Metal-binding |
| Molecular function | Hydrolase |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | fructose 1,6-bisphosphate 1-phosphatase activity Inferred from electronic annotation. Source: EC magnesium ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 339 | 339 | Fructose-1,6-bisphosphatase, cytosolic | PRO_0000200517 | |||||
Regions | |||||||||
| Region | 124 – 127 | 4 | Substrate binding By similarity | ||||||
Sites | |||||||||
| Metal binding | 71 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 100 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 100 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 121 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 121 | 1 | Magnesium 3 By similarity | ||||||
| Metal binding | 123 | 1 | Magnesium 2; via carbonyl oxygen By similarity | ||||||
| Metal binding | 124 | 1 | Magnesium 3 By similarity | ||||||
| Metal binding | 283 | 1 | Magnesium 3 By similarity | ||||||
| Binding site | 215 | 1 | Substrate By similarity | ||||||
| Binding site | 247 | 1 | Substrate By similarity | ||||||
| Binding site | 267 | 1 | Substrate By similarity | ||||||
| Binding site | 277 | 1 | Substrate By similarity | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning of a cDNA encoding cytosolic fructose-1,6-bisphosphatase from rice (Oryza sativa L.)." Takahashi S., Hirose T., Imaizumi N., Ohsugi R. Plant Gene Register PGR98-084 Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Nipponbare. Tissue: Leaf. |
| [2] | "The genome sequence and structure of rice chromosome 1." Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. Gojobori T.Nature 420:312-316(2002) [PubMed: 12447438] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [3] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [4] | "Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB007193 mRNA. Translation: BAA25422.1. AP003270 Genomic DNA. Translation: BAD81916.1. AP008207 Genomic DNA. Translation: BAF06820.1. Sequence problems. |
| RefSeq | NP_001044906.1. |
| UniGene | Os.3408 |
3D structure databases | |
| SMR | Q0JHF8. Positions 11-337. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 4325071. |
| KEGG | osa:4325071. |
Organism-specific databases | |
| Gramene | O64421. |
Phylogenomic databases | |
| HOGENOM | HBG731261. |
Family and domain databases | |
| InterPro | IPR000146. Fructose_bisphosphatase. IPR020548. Fructose_bisphosphatase_AS. [Graphical view] |
| PANTHER | PTHR11556. In_FB_phphtase. 1 hit. |
| Pfam | PF00316. FBPase. 1 hit. [Graphical view] |
| PRINTS | PR00115. F16BPHPHTASE. |
| PROSITE | PS00124. FBPASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | F16P2_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q0JHF8 Secondary accession number(s): O64421, Q5N9E2, Q94JN1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| SIMILARITY comments Index of protein domains and families |

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