Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q0JDC6 (INV3_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-fructofuranosidase, insoluble isoenzyme 3
EC=3.2.1.26
Alternative name(s):
Cell wall beta-fructosidase 3
Invertase 3
OsCIN3
Sucrose hydrolase 3
Gene names
Name:CIN3
Synonyms:INV4
Ordered Locus Names:Os04g0413200, LOC_Os04g33720
ORF Names:OJ000126_13.7, OsJ_014163
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza ›

Protein attributes

Sequence length586 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.

Subcellular location

Secreted › extracellular space › apoplast Probable. Secreted › cell wall Probable. Note: Associated to the cell wall Probable.

Tissue specificity

Weakly expressed in flowers. Ref.1

Sequence similarities

Belongs to the glycosyl hydrolase 32 family.

Sequence caution

The sequence CAD40590.2 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Cellular componentApoplast
Cell wall
Secreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processnectar secretion

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to karrikin

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to wounding

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

starch metabolic process

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentapoplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

cell wall

Inferred from electronic annotation. Source: UniProtKB-SubCell

vacuole

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functioninulinase activity

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

levanase activity

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

sucrose alpha-glucosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential
Chain27 – 586560Beta-fructofuranosidase, insoluble isoenzyme 3
PRO_0000033381

Regions

Region58 – 614Substrate binding By similarity
Region120 – 1212Substrate binding By similarity
Region184 – 1852Substrate binding By similarity

Sites

Active site611 By similarity
Binding site771Substrate By similarity
Binding site851Substrate By similarity
Binding site2381Substrate By similarity
Binding site2811Substrate By similarity

Amino acid modifications

Glycosylation1541N-linked (GlcNAc...) Potential
Glycosylation1791N-linked (GlcNAc...) Potential
Glycosylation3411N-linked (GlcNAc...) Potential
Glycosylation3901N-linked (GlcNAc...) Potential
Glycosylation4791N-linked (GlcNAc...) Potential
Disulfide bond441 ↔ 488 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q0JDC6 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: C7D262407F51245F

FASTA58666,208
        10         20         30         40         50         60 
MATARARAAL VFVALLQMAA VVVVRASHVV YPELQSLEAK HVDGKLRTGY HFQPPKHWIN 

        70         80         90        100        110        120 
DPNGPMYYKG LYHLFYQYNP KGAVWGNIEW AHSVSTDLID WTALEPGIYP SKTFDEKGCW 

       130        140        150        160        170        180 
SGSATVLPSG VPVIMYTGID PDERQVQNVA YPVNLSDPYL REWYKPDYNP IINPDGGINA 

       190        200        210        220        230        240 
SAFRDPTTAW YGPDGHWRLL VGSKVNMKGL AVLYRSRDFK KWVKAHHPLH SAHTGMWECP 

       250        260        270        280        290        300 
DFFPVAVAGG SRHYRRGVDT AELHDAAVAE EVKYVLKVSL DLTRYEYYTV GWYDHATDRY 

       310        320        330        340        350        360 
VPDAAFPDND YGLRYDYGDF YASKSFYDPA KRRRIVWGWA NESDTVPDDR RKGWAGIQAI 

       370        380        390        400        410        420 
PRKLWLSADG KQLVQWPVEE LKALRAKHVN VTDKVIKKGN YFEVTGFKSV QSDVDMAFAI 

       430        440        450        460        470        480 
KDLSKAEEFD PAWRTDAEAL CKKLGSDVDG GVGPFGLWAL ASGDLKERTA VFFRVFKAND 

       490        500        510        520        530        540 
SSHVVLMCND PTRSSYESKI YRPTFAGFVD VDIAKNKQIA LRTLIDHSVV ESFGARGKTC 

       550        560        570        580 
ILTRVYPRKA VGDDAHLFVF NNGESDVKVT NLDAWEMKTP KMNAEE

« Hide

References

« Hide 'large scale' references
[1]"Molecular cloning and expression analysis of the cell-wall invertase gene family in rice (Oryza sativa L.)."
Cho J.-I., Lee S.-K., Ko S., Kim H.-K., Jun S.-H., Lee Y.-H., Bhoo S.H., Lee K.-W., An G., Hahn T.-R., Jeon J.-S.
Plant Cell Rep. 24:225-236(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.
Strain: cv. Nipponbare.
[2]"Sequence and analysis of rice chromosome 4."
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L. expand/collapse author list , Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.
Nature 420:316-320(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[5]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY578160 mRNA. Translation: AAT84403.1.
AL662945 Genomic DNA. Translation: CAD40590.2. Sequence problems.
AP008210 Genomic DNA. Translation: BAF14661.1.
CM000141 Genomic DNA. No translation available.
RefSeqNP_001052747.1. NM_001059282.1.
UniGeneOs.50337.

3D structure databases

ProteinModelPortalQ0JDC6.
SMRQ0JDC6. Positions 44-583.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsLOC_Os04g33720.1; LOC_Os04g33720.1; LOC_Os04g33720.
GeneID4335789.
KEGGdosa:Os04t0413200-01.
osa:4335789.

Organism-specific databases

GrameneQ0JDC6.

Phylogenomic databases

eggNOGCOG1621.
KOK01193.
OMAHRTAYHF.
ProtClustDBCLSN2694776.

Gene expression databases

ArrayExpressQ0JDC6.

Family and domain databases

Gene3D2.115.10.20. 1 hit.
2.60.120.560. 2 hits.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR001362. Glyco_hydro_32.
IPR018053. Glyco_hydro_32_AS.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PfamPF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 1 hit.
[Graphical view]
SMARTSM00640. Glyco_32. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
PROSITEPS00609. GLYCOSYL_HYDROL_F32. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameINV3_ORYSJ
AccessionPrimary (citable) accession number: Q0JDC6
Secondary accession number(s): A3ATP1 expand/collapse secondary AC list , Q56UD3, Q6VEF3, Q7XVJ3, Q84TL3
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: October 3, 2006
Last modified: May 29, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents