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Protein

Probable protein phosphatase 2C 44

Gene

Os04g0609600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi107 – 1071Manganese 1By similarity
Metal bindingi107 – 1071Manganese 2By similarity
Metal bindingi108 – 1081Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi271 – 2711Manganese 2By similarity
Metal bindingi310 – 3101Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. phosphoprotein phosphatase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 44 (EC:3.1.3.16)
Short name:
OsPP2C44
Gene namesi
Ordered Locus Names:Os04g0609600, LOC_Os04g52000
ORF Names:OSJNBa0085I10.2
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Organism-specific databases

GrameneiQ0JAA0.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 321321Probable protein phosphatase 2C 44PRO_0000363291Add
BLAST

Expressioni

Gene expression databases

ExpressionAtlasiQ0JAA0. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ0JAA0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini69 – 312244PP2C-likeAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi9 – 3022Ser-richAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PP2C-like domain.Curated

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000233896.
InParanoidiQ0JAA0.
OMAiAEYKYEK.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0JAA0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVGRMERQSA SSSASCSPSS SAAGTSSSSS ACGGKKRPDI LNMIRSATCL
60 70 80 90 100
NSSSTDTGKG RSKQSSNKVT HGFHLVEGKS GHDMEDYHVA EYKYDKSHEL
110 120 130 140 150
GLFAIFDGHL GDSVPSYLKA NLFCNILKEP IFWTNPQEAI KNAYRSTNKY
160 170 180 190 200
ILENAKQLGP GGSTAVTAIV VDGKDMWVAN VGDSRAVVCE RGAANQLTVD
210 220 230 240 250
HEPHTTNERQ RIEKQGGFVT TFPGDVPRVN GQLAVARAFG DQSLKAHLSS
260 270 280 290 300
EPDVRHVPIN SSIEFVILAS DGLWKVMKNQ EAVDLVKSIK DPQAAAKRLT
310 320
TEALARKSKD DISCIVIRFR C
Length:321
Mass (Da):34,773
Last modified:October 3, 2006 - v1
Checksum:i797BA13B5E9CEDAD
GO

Sequence cautioni

The sequence CAE03557.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti51 – 511N → D in AK070129. (PubMed:12869764)Curated
Sequence conflicti260 – 2601N → S in AK070129. (PubMed:12869764)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606684 Genomic DNA. Translation: CAE03557.1. Sequence problems.
AP008210 Genomic DNA. Translation: BAF15737.1.
AK070129 mRNA. No translation available.
RefSeqiNP_001053823.1. NM_001060358.1.
UniGeneiOs.11204.

Genome annotation databases

EnsemblPlantsiOS04T0609600-01; OS04T0609600-01; OS04G0609600.
GeneIDi4336940.
KEGGiosa:4336940.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606684 Genomic DNA. Translation: CAE03557.1. Sequence problems.
AP008210 Genomic DNA. Translation: BAF15737.1.
AK070129 mRNA. No translation available.
RefSeqiNP_001053823.1. NM_001060358.1.
UniGeneiOs.11204.

3D structure databases

ProteinModelPortaliQ0JAA0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS04T0609600-01; OS04T0609600-01; OS04G0609600.
GeneIDi4336940.
KEGGiosa:4336940.

Organism-specific databases

GrameneiQ0JAA0.

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000233896.
InParanoidiQ0JAA0.
OMAiAEYKYEK.

Gene expression databases

ExpressionAtlasiQ0JAA0. baseline.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  5. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C44_ORYSJ
AccessioniPrimary (citable) accession number: Q0JAA0
Secondary accession number(s): Q7XPM4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: October 3, 2006
Last modified: January 7, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.