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Q0J0N4

- BGL30_ORYSJ

UniProt

Q0J0N4 - BGL30_ORYSJ

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Protein

Beta-glucosidase 30

Gene

BGLU30

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei46 – 461SubstrateBy similarity
Binding sitei149 – 1491SubstrateBy similarity
Binding sitei194 – 1941SubstrateBy similarity
Active sitei195 – 1951Proton donorBy similarity
Binding sitei338 – 3381SubstrateBy similarity
Active sitei409 – 4091NucleophileBy similarity
Binding sitei456 – 4561SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 30 (EC:3.2.1.21)
Short name:
Os9bglu30
Gene namesi
Name:BGLU30
Ordered Locus Names:Os09g0491100, LOC_Os09g31430
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 9

Organism-specific databases

GrameneiQ0J0N4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence AnalysisAdd
BLAST
Chaini26 – 500475Beta-glucosidase 30PRO_0000390347Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi63 – 631N-linked (GlcNAc...)Sequence Analysis
Glycosylationi114 – 1141N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi214 ↔ 222By similarity
Glycosylationi363 – 3631N-linked (GlcNAc...)Sequence Analysis
Glycosylationi416 – 4161N-linked (GlcNAc...)Sequence Analysis
Glycosylationi417 – 4171N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiQ0J0N4.

Expressioni

Gene expression databases

ExpressionAtlasiQ0J0N4. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ0J0N4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni463 – 4642Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
InParanoidiQ0J0N4.
KOiK01188.
OMAiCAFYCAN.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q0J0N4-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MGIRMGRRLL FTLFLGALFC NGVYAKFTRY SFPKDFIFGT GSAAYQYEGA
60 70 80 90 100
YKEGGKGPSV WDNFTHIPGK ILNNDNGDVA NDFYHRYKED VSLLKDMNMD
110 120 130 140 150
AFRFSIAWTR ILPNGSLSGG INKEGVAFYN SLINDVIAKG MIPFVTIFHW
160 170 180 190 200
DTPLALESKY GGFLSEDIVK EYVDFAEVCF REFGDRVKYW TTFNEPFTYS
210 220 230 240 250
AYGYGKGVFA PGRCSSYVSK SCGVGDSSRE PYLVAHHIHL SHAAAVQLYR
260 270 280 290 300
TKYQPTQKGQ IGMVVVTHWF VPYDNSDADR GAVQRSLDFI YGWFMDPIVH
310 320 330 340 350
GDYPGTMRGW LGNRLPEFTP EQSAMVKGSY DFIGVNYYTT YYAKSIPPPN
360 370 380 390 400
SNELSYDLDN RANTTGFRNG KPIGPQEFTP IFFNYPPGLR ELLLYTKRRY
410 420 430 440 450
NNPTIYVTEN GIDEGNNSTL PEALKDGHRI EFHSKHLQFV NHAIKNGVNV
460 470 480 490 500
KGYFTWTFMD CFEWGDGYLD RFGLIYVDRK TLKRYRKESS YWIEDFLKRH
Length:500
Mass (Da):57,388
Last modified:October 3, 2006 - v1
Checksum:i1909568E1D9EFFD1
GO
Isoform 2 (identifier: Q0J0N4-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     377-436: EFTPIFFNYP...GHRIEFHSKH → VSVSSSSTPR...SSSTTPSRMG
     437-500: Missing.

Note: No experimental confirmation available.

Show »
Length:436
Mass (Da):48,782
Checksum:iEF36799CC8700D9B
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti191 – 1911T → F in AAL14713. 1 PublicationCurated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei377 – 43660EFTPI…FHSKH → VSVSSSSTPRGDTTTRPSML QKTASMRVTTAHCQRRSRMD TGSSSTQSTCSSSTTPSRMG in isoform 2. 1 PublicationVSP_038512Add
BLAST
Alternative sequencei437 – 50064Missing in isoform 2. 1 PublicationVSP_038513Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY056828 mRNA. Translation: AAL14713.1.
AP008215 Genomic DNA. Translation: BAF25453.1.
AK061340 mRNA. No translation available.
RefSeqiNP_001063539.1. NM_001070074.1. [Q0J0N4-1]
UniGeneiOs.81365.

Genome annotation databases

EnsemblPlantsiOS09T0491100-01; OS09T0491100-01; OS09G0491100. [Q0J0N4-1]
GeneIDi4347441.
KEGGiosa:4347441.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY056828 mRNA. Translation: AAL14713.1 .
AP008215 Genomic DNA. Translation: BAF25453.1 .
AK061340 mRNA. No translation available.
RefSeqi NP_001063539.1. NM_001070074.1. [Q0J0N4-1 ]
UniGenei Os.81365.

3D structure databases

ProteinModelPortali Q0J0N4.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Proteomic databases

PRIDEi Q0J0N4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS09T0491100-01 ; OS09T0491100-01 ; OS09G0491100 . [Q0J0N4-1 ]
GeneIDi 4347441.
KEGGi osa:4347441.

Organism-specific databases

Gramenei Q0J0N4.

Phylogenomic databases

eggNOGi COG2723.
InParanoidi Q0J0N4.
KOi K01188.
OMAi CAFYCAN.

Gene expression databases

ExpressionAtlasi Q0J0N4. baseline and differential.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Beta-glucosidase isozyme expression in rice."
    Opassiri R., Ketudat Cairns J.R., Vichitphan S., Esen A.
    Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Orion.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 135-500 (ISOFORM 2).
    Strain: cv. Nipponbare.
  5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL30_ORYSJ
AccessioniPrimary (citable) accession number: Q0J0N4
Secondary accession number(s): Q93ZK6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: October 3, 2006
Last modified: October 29, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3