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Q0J0N4

- BGL30_ORYSJ

UniProt

Q0J0N4 - BGL30_ORYSJ

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Protein

Beta-glucosidase 30

Gene
BGLU30, Os09g0491100, LOC_Os09g31430
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei46 – 461Substrate By similarity
Binding sitei149 – 1491Substrate By similarity
Binding sitei194 – 1941Substrate By similarity
Active sitei195 – 1951Proton donor By similarity
Binding sitei338 – 3381Substrate By similarity
Active sitei409 – 4091Nucleophile By similarity
Binding sitei456 – 4561Substrate By similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 30 (EC:3.2.1.21)
Short name:
Os9bglu30
Gene namesi
Name:BGLU30
Ordered Locus Names:Os09g0491100, LOC_Os09g31430
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 9

Organism-specific databases

GrameneiQ0J0N4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 Reviewed predictionAdd
BLAST
Chaini26 – 500475Beta-glucosidase 30PRO_0000390347Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi63 – 631N-linked (GlcNAc...) Reviewed prediction
Glycosylationi114 – 1141N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi214 ↔ 222 By similarity
Glycosylationi363 – 3631N-linked (GlcNAc...) Reviewed prediction
Glycosylationi416 – 4161N-linked (GlcNAc...) Reviewed prediction
Glycosylationi417 – 4171N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiQ0J0N4.

Structurei

3D structure databases

ProteinModelPortaliQ0J0N4.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni463 – 4642Substrate binding By similarity

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
KOiK01188.
OMAiCAFYCAN.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q0J0N4-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MGIRMGRRLL FTLFLGALFC NGVYAKFTRY SFPKDFIFGT GSAAYQYEGA    50
YKEGGKGPSV WDNFTHIPGK ILNNDNGDVA NDFYHRYKED VSLLKDMNMD 100
AFRFSIAWTR ILPNGSLSGG INKEGVAFYN SLINDVIAKG MIPFVTIFHW 150
DTPLALESKY GGFLSEDIVK EYVDFAEVCF REFGDRVKYW TTFNEPFTYS 200
AYGYGKGVFA PGRCSSYVSK SCGVGDSSRE PYLVAHHIHL SHAAAVQLYR 250
TKYQPTQKGQ IGMVVVTHWF VPYDNSDADR GAVQRSLDFI YGWFMDPIVH 300
GDYPGTMRGW LGNRLPEFTP EQSAMVKGSY DFIGVNYYTT YYAKSIPPPN 350
SNELSYDLDN RANTTGFRNG KPIGPQEFTP IFFNYPPGLR ELLLYTKRRY 400
NNPTIYVTEN GIDEGNNSTL PEALKDGHRI EFHSKHLQFV NHAIKNGVNV 450
KGYFTWTFMD CFEWGDGYLD RFGLIYVDRK TLKRYRKESS YWIEDFLKRH 500
Length:500
Mass (Da):57,388
Last modified:October 3, 2006 - v1
Checksum:i1909568E1D9EFFD1
GO
Isoform 2 (identifier: Q0J0N4-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     377-436: EFTPIFFNYP...GHRIEFHSKH → VSVSSSSTPR...SSSTTPSRMG
     437-500: Missing.

Note: No experimental confirmation available.

Show »
Length:436
Mass (Da):48,782
Checksum:iEF36799CC8700D9B
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei377 – 43660EFTPI…FHSKH → VSVSSSSTPRGDTTTRPSML QKTASMRVTTAHCQRRSRMD TGSSSTQSTCSSSTTPSRMG in isoform 2. VSP_038512Add
BLAST
Alternative sequencei437 – 50064Missing in isoform 2. VSP_038513Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti191 – 1911T → F in AAL14713. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY056828 mRNA. Translation: AAL14713.1.
AP008215 Genomic DNA. Translation: BAF25453.1.
AK061340 mRNA. No translation available.
RefSeqiNP_001063539.1. NM_001070074.1. [Q0J0N4-1]
UniGeneiOs.81365.

Genome annotation databases

EnsemblPlantsiOS09T0491100-01; OS09T0491100-01; OS09G0491100. [Q0J0N4-1]
GeneIDi4347441.
KEGGiosa:4347441.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY056828 mRNA. Translation: AAL14713.1 .
AP008215 Genomic DNA. Translation: BAF25453.1 .
AK061340 mRNA. No translation available.
RefSeqi NP_001063539.1. NM_001070074.1. [Q0J0N4-1 ]
UniGenei Os.81365.

3D structure databases

ProteinModelPortali Q0J0N4.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Proteomic databases

PRIDEi Q0J0N4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS09T0491100-01 ; OS09T0491100-01 ; OS09G0491100 . [Q0J0N4-1 ]
GeneIDi 4347441.
KEGGi osa:4347441.

Organism-specific databases

Gramenei Q0J0N4.

Phylogenomic databases

eggNOGi COG2723.
KOi K01188.
OMAi CAFYCAN.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Beta-glucosidase isozyme expression in rice."
    Opassiri R., Ketudat Cairns J.R., Vichitphan S., Esen A.
    Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Orion.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 135-500 (ISOFORM 2).
    Strain: cv. Nipponbare.
  5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL30_ORYSJ
AccessioniPrimary (citable) accession number: Q0J0N4
Secondary accession number(s): Q93ZK6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: October 3, 2006
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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