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Q0J0N4

- BGL30_ORYSJ

UniProt

Q0J0N4 - BGL30_ORYSJ

Protein

Beta-glucosidase 30

Gene

BGLU30

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (03 Oct 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei46 – 461SubstrateBy similarity
    Binding sitei149 – 1491SubstrateBy similarity
    Binding sitei194 – 1941SubstrateBy similarity
    Active sitei195 – 1951Proton donorBy similarity
    Binding sitei338 – 3381SubstrateBy similarity
    Active sitei409 – 4091NucleophileBy similarity
    Binding sitei456 – 4561SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 30 (EC:3.2.1.21)
    Short name:
    Os9bglu30
    Gene namesi
    Name:BGLU30
    Ordered Locus Names:Os09g0491100, LOC_Os09g31430
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 9

    Organism-specific databases

    GrameneiQ0J0N4.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525Sequence AnalysisAdd
    BLAST
    Chaini26 – 500475Beta-glucosidase 30PRO_0000390347Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi63 – 631N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi114 – 1141N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi214 ↔ 222By similarity
    Glycosylationi363 – 3631N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi416 – 4161N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi417 – 4171N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Proteomic databases

    PRIDEiQ0J0N4.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0J0N4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni463 – 4642Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    KOiK01188.
    OMAiCAFYCAN.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequences (2)i

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    This entry describes 2 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q0J0N4-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MGIRMGRRLL FTLFLGALFC NGVYAKFTRY SFPKDFIFGT GSAAYQYEGA    50
    YKEGGKGPSV WDNFTHIPGK ILNNDNGDVA NDFYHRYKED VSLLKDMNMD 100
    AFRFSIAWTR ILPNGSLSGG INKEGVAFYN SLINDVIAKG MIPFVTIFHW 150
    DTPLALESKY GGFLSEDIVK EYVDFAEVCF REFGDRVKYW TTFNEPFTYS 200
    AYGYGKGVFA PGRCSSYVSK SCGVGDSSRE PYLVAHHIHL SHAAAVQLYR 250
    TKYQPTQKGQ IGMVVVTHWF VPYDNSDADR GAVQRSLDFI YGWFMDPIVH 300
    GDYPGTMRGW LGNRLPEFTP EQSAMVKGSY DFIGVNYYTT YYAKSIPPPN 350
    SNELSYDLDN RANTTGFRNG KPIGPQEFTP IFFNYPPGLR ELLLYTKRRY 400
    NNPTIYVTEN GIDEGNNSTL PEALKDGHRI EFHSKHLQFV NHAIKNGVNV 450
    KGYFTWTFMD CFEWGDGYLD RFGLIYVDRK TLKRYRKESS YWIEDFLKRH 500
    Length:500
    Mass (Da):57,388
    Last modified:October 3, 2006 - v1
    Checksum:i1909568E1D9EFFD1
    GO
    Isoform 2 (identifier: Q0J0N4-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         377-436: EFTPIFFNYP...GHRIEFHSKH → VSVSSSSTPR...SSSTTPSRMG
         437-500: Missing.

    Note: No experimental confirmation available.

    Show »
    Length:436
    Mass (Da):48,782
    Checksum:iEF36799CC8700D9B
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti191 – 1911T → F in AAL14713. 1 PublicationCurated

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei377 – 43660EFTPI…FHSKH → VSVSSSSTPRGDTTTRPSML QKTASMRVTTAHCQRRSRMD TGSSSTQSTCSSSTTPSRMG in isoform 2. 1 PublicationVSP_038512Add
    BLAST
    Alternative sequencei437 – 50064Missing in isoform 2. 1 PublicationVSP_038513Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY056828 mRNA. Translation: AAL14713.1.
    AP008215 Genomic DNA. Translation: BAF25453.1.
    AK061340 mRNA. No translation available.
    RefSeqiNP_001063539.1. NM_001070074.1. [Q0J0N4-1]
    UniGeneiOs.81365.

    Genome annotation databases

    EnsemblPlantsiOS09T0491100-01; OS09T0491100-01; OS09G0491100. [Q0J0N4-1]
    GeneIDi4347441.
    KEGGiosa:4347441.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY056828 mRNA. Translation: AAL14713.1 .
    AP008215 Genomic DNA. Translation: BAF25453.1 .
    AK061340 mRNA. No translation available.
    RefSeqi NP_001063539.1. NM_001070074.1. [Q0J0N4-1 ]
    UniGenei Os.81365.

    3D structure databases

    ProteinModelPortali Q0J0N4.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Proteomic databases

    PRIDEi Q0J0N4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS09T0491100-01 ; OS09T0491100-01 ; OS09G0491100 . [Q0J0N4-1 ]
    GeneIDi 4347441.
    KEGGi osa:4347441.

    Organism-specific databases

    Gramenei Q0J0N4.

    Phylogenomic databases

    eggNOGi COG2723.
    KOi K01188.
    OMAi CAFYCAN.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Beta-glucosidase isozyme expression in rice."
      Opassiri R., Ketudat Cairns J.R., Vichitphan S., Esen A.
      Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Orion.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 135-500 (ISOFORM 2).
      Strain: cv. Nipponbare.
    5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
      Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
      BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL30_ORYSJ
    AccessioniPrimary (citable) accession number: Q0J0N4
    Secondary accession number(s): Q93ZK6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 2009
    Last sequence update: October 3, 2006
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3