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Protein

Beta-galactosidase 12

Gene

Os09g0539200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei192Proton donorSequence analysis1
Active sitei262NucleophileSequence analysis1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidase 12 (EC:3.2.1.23)
Short name:
Lactase 12
Gene namesi
Ordered Locus Names:Os09g0539200, LOC_Os09g36810
ORF Names:OsJ_028990
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 9

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_000029416426 – 911Beta-galactosidase 12Add BLAST886

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi263N-linked (GlcNAc...)Sequence analysis1
Glycosylationi389N-linked (GlcNAc...)Sequence analysis1
Glycosylationi473N-linked (GlcNAc...)Sequence analysis1
Glycosylationi777N-linked (GlcNAc...)Sequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ0IZZ8.

Expressioni

Gene expression databases

GenevisibleiQ0IZZ8. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os09g36810.1.

Structurei

3D structure databases

ProteinModelPortaliQ0IZZ8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini744 – 831SUEL-type lectinPROSITE-ProRule annotationAdd BLAST88

Sequence similaritiesi

Belongs to the glycosyl hydrolase 35 family.Curated
Contains 1 SUEL-type lectin domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG0496. Eukaryota.
COG1874. LUCA.
HOGENOMiHOG000239919.
InParanoidiQ0IZZ8.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR031330. Gly_Hdrlase_35_cat.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0IZZ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAARVAAAVA AALLAAALLL PGAAAEWTLT KKGTVVSYDE RSLMIDGKRD
60 70 80 90 100
LFFSGAIHYP RSPPEMWDKL VKTAKMGGLN TIETYVFWNG HEPEPGKYYF
110 120 130 140 150
EGRFDLIRFL NVIKDNDMYA IVRIGPFIQA EWNHGGLPYW LREIGHIIFR
160 170 180 190 200
ANNEPFKREM EKFVRFIVQK LKDAEMFAPQ GGPIILSQIE NEYGNIKKDR
210 220 230 240 250
KVEGDKYLEW AAEMAISTGI GVPWVMCKQS IAPGEVIPTC NGRHCGDTWT
260 270 280 290 300
LLDKNKPRLW TENWTAQFRT FGDQLAQRSA EDIAYAVLRF FAKGGTLVNY
310 320 330 340 350
YMYHGGTNFG RTGASYVLTG YYDEAPMDEY GMCKEPKFGH LRDLHNVIKS
360 370 380 390 400
YHKAFLWGKQ SFEILGHGYE AHNYELPEDK LCLSFLSNNN TGEDGTVVFR
410 420 430 440 450
GEKFYVPSRS VSILADCKTV VYNTKRVFVQ HSERSFHTTD ETSKNNVWEM
460 470 480 490 500
YSEAIPKFRK TKVRTKQPLE QYNQTKDTSD YLWYTTSFRL ESDDLPFRRD
510 520 530 540 550
IRPVIQIKST AHAMIGFAND AFVGTGRGSK REKSFVFEKP MDLRVGINHI
560 570 580 590 600
AMLSSSMGMK DSGGELVEVK GGIQDCVVQG LNTGTLDLQG NGWGHKARLE
610 620 630 640 650
GEDKEIYTEK GMAQFQWKPA ENDLPITWYK RYFDEPDGDD PIVVDMSSMS
660 670 680 690 700
KGMIYVNGEG IGRYWTSFIT LAGHPSQSVY HIPRAFLKPK GNLLIIFEEE
710 720 730 740 750
LGKPGGILIQ TVRRDDICVF ISEHNPAQIK TWESDGGQIK LIAEDTSTRG
760 770 780 790 800
TLNCPPKRTI QEVVFASFGN PEGACGNFTA GTCHTPDAKA IVEKECLGKE
810 820 830 840 850
SCVLPVVNTV YGADINCPAT TATLAVQLLL ASHVMRIAIC VRPMLFARNG
860 870 880 890 900
IVTSVLAHIL GHPEWDRKSL RVKMAGRQNP CPDFTPTKSY GYLFSKPLVA
910
LTVSLDSNLS P
Length:911
Mass (Da):102,374
Last modified:July 10, 2007 - v2
Checksum:iF2E09CB91011ED68
GO

Sequence cautioni

The sequence BAF25717 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008215 Genomic DNA. Translation: BAF25717.1. Sequence problems.
AP014965 Genomic DNA. No translation available.
CM000146 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008215 Genomic DNA. Translation: BAF25717.1. Sequence problems.
AP014965 Genomic DNA. No translation available.
CM000146 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliQ0IZZ8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os09g36810.1.

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Proteomic databases

PaxDbiQ0IZZ8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG0496. Eukaryota.
COG1874. LUCA.
HOGENOMiHOG000239919.
InParanoidiQ0IZZ8.

Gene expression databases

GenevisibleiQ0IZZ8. OS.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR031330. Gly_Hdrlase_35_cat.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiBGA12_ORYSJ
AccessioniPrimary (citable) accession number: Q0IZZ8
Secondary accession number(s): A3C118
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: July 10, 2007
Last modified: September 7, 2016
This is version 60 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.