SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q0IZZ8

- BGA12_ORYSJ

UniProt

Q0IZZ8 - BGA12_ORYSJ

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Beta-galactosidase 12
Gene
Os09g0539200, LOC_Os09g36810, OsJ_028990
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei192 – 1921Proton donor Reviewed prediction
Active sitei262 – 2621Nucleophile Reviewed prediction

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidase 12 (EC:3.2.1.23)
Short name:
Lactase 12
Gene namesi
Ordered Locus Names:Os09g0539200, LOC_Os09g36810
ORF Names:OsJ_028990
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 9

Organism-specific databases

GrameneiQ0IZZ8.

Subcellular locationi

Secretedextracellular spaceapoplast Reviewed prediction

GO - Cellular componenti

  1. apoplast Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 Reviewed prediction
Add
BLAST
Chaini26 – 911886Beta-galactosidase 12
PRO_0000294164Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi263 – 2631N-linked (GlcNAc...) Reviewed prediction
Glycosylationi389 – 3891N-linked (GlcNAc...) Reviewed prediction
Glycosylationi473 – 4731N-linked (GlcNAc...) Reviewed prediction
Glycosylationi777 – 7771N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ0IZZ8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini744 – 83188SUEL-type lectin
Add
BLAST

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG1874.
HOGENOMiHOG000239919.
OMAiHIIFRAN.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0IZZ8-1 [UniParc]FASTAAdd to Basket

« Hide

MAARVAAAVA AALLAAALLL PGAAAEWTLT KKGTVVSYDE RSLMIDGKRD    50
LFFSGAIHYP RSPPEMWDKL VKTAKMGGLN TIETYVFWNG HEPEPGKYYF 100
EGRFDLIRFL NVIKDNDMYA IVRIGPFIQA EWNHGGLPYW LREIGHIIFR 150
ANNEPFKREM EKFVRFIVQK LKDAEMFAPQ GGPIILSQIE NEYGNIKKDR 200
KVEGDKYLEW AAEMAISTGI GVPWVMCKQS IAPGEVIPTC NGRHCGDTWT 250
LLDKNKPRLW TENWTAQFRT FGDQLAQRSA EDIAYAVLRF FAKGGTLVNY 300
YMYHGGTNFG RTGASYVLTG YYDEAPMDEY GMCKEPKFGH LRDLHNVIKS 350
YHKAFLWGKQ SFEILGHGYE AHNYELPEDK LCLSFLSNNN TGEDGTVVFR 400
GEKFYVPSRS VSILADCKTV VYNTKRVFVQ HSERSFHTTD ETSKNNVWEM 450
YSEAIPKFRK TKVRTKQPLE QYNQTKDTSD YLWYTTSFRL ESDDLPFRRD 500
IRPVIQIKST AHAMIGFAND AFVGTGRGSK REKSFVFEKP MDLRVGINHI 550
AMLSSSMGMK DSGGELVEVK GGIQDCVVQG LNTGTLDLQG NGWGHKARLE 600
GEDKEIYTEK GMAQFQWKPA ENDLPITWYK RYFDEPDGDD PIVVDMSSMS 650
KGMIYVNGEG IGRYWTSFIT LAGHPSQSVY HIPRAFLKPK GNLLIIFEEE 700
LGKPGGILIQ TVRRDDICVF ISEHNPAQIK TWESDGGQIK LIAEDTSTRG 750
TLNCPPKRTI QEVVFASFGN PEGACGNFTA GTCHTPDAKA IVEKECLGKE 800
SCVLPVVNTV YGADINCPAT TATLAVQLLL ASHVMRIAIC VRPMLFARNG 850
IVTSVLAHIL GHPEWDRKSL RVKMAGRQNP CPDFTPTKSY GYLFSKPLVA 900
LTVSLDSNLS P 911
Length:911
Mass (Da):102,374
Last modified:July 10, 2007 - v2
Checksum:iF2E09CB91011ED68
GO

Sequence cautioni

The sequence BAF25717.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008215 Genomic DNA. Translation: BAF25717.1. Sequence problems.
CM000146 Genomic DNA. No translation available.
RefSeqiNP_001063803.1. NM_001070338.1.
UniGeneiOs.49945.

Genome annotation databases

GeneIDi4347718.
KEGGiosa:4347718.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008215 Genomic DNA. Translation: BAF25717.1 . Sequence problems.
CM000146 Genomic DNA. No translation available.
RefSeqi NP_001063803.1. NM_001070338.1.
UniGenei Os.49945.

3D structure databases

ProteinModelPortali Q0IZZ8.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH35. Glycoside Hydrolase Family 35.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4347718.
KEGGi osa:4347718.

Organism-specific databases

Gramenei Q0IZZ8.

Phylogenomic databases

eggNOGi COG1874.
HOGENOMi HOG000239919.
OMAi HIIFRAN.

Family and domain databases

Gene3Di 2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view ]
PANTHERi PTHR23421. PTHR23421. 1 hit.
Pfami PF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view ]
PRINTSi PR00742. GLHYDRLASE35.
SUPFAMi SSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiBGA12_ORYSJ
AccessioniPrimary (citable) accession number: Q0IZZ8
Secondary accession number(s): A3C118
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: July 10, 2007
Last modified: November 13, 2013
This is version 50 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi