Q0IXT4 (Q0IXT4_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Os10g0400800 protein EMBL BAF26459.1

Gene names

Name:

Os10g0400800 EMBL BAF26459.1

Organism

Oryza sativa subsp. japonica (Rice) [Reference proteome]

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › Oryza sativa

Protein attributes

Sequence length	504 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	phenylalanyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro phenylalanine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAF26459.1

Sequences

	Sequence		Length	Mass (Da)
	Q0IXT4 [UniParc]. Last modified October 3, 2006. Version 1. Checksum: 611CF98406F07DB0	FASTA	504	57,016
	10 20 30 40 50 60 STPRQLSPLA AMADVEACLL AHLNSGGEVP DSRSYASSLR VTHDELEAVI KSLSAFRIVD 70 80 90 100 110 120 TTDITKETWV LTDEAKGYVA GGSPEAQLVA AIPPEGASKD VLREKLGSVF DIGMKTAAKN 130 140 150 160 170 180 KWIGFEKGNK DLVLRKVNTI KDDLQEQLKS LESGEVLSDK VIDDLKRRKL ITKEKSIWYA 190 200 210 220 230 240 LKKGPQFVAK RKKLATDVTQ EHLRSGDWKD LEFKDYNFGA QGQPIAIGYV QPLLEVREEI 250 260 270 280 290 300 QNIFLQMGFT EMPTNNYVES SFWNFDALFQ PQQHPARDSH DTFFLEAPAA TKQLPEDYLE 310 320 330 340 350 360 KVKEVHQRGG YGSKGYGYDW KRDEAEKNLL RTHTTAVSTR MLYKLAQEKP FAPKRYYSID 370 380 390 400 410 420 RVFRNEAVDR THLAEFHQIE GLICDYGLTL GDLIGVLEDF FSSLGMSKLR FKPAYNPYTE 430 440 450 460 470 480 PSMEIFSYHE GLKKWVEVGN SGMFRPEMLL PMGLPEGVNV IAWGLSLERP TMILYGIDNI 490 500 RDLFGPKVDF NLIKSNPLCR LGLQ

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[2]	"The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008216 Genomic DNA. Translation: BAF26459.1.
RefSeq	NP_001064545.1. NM_001071080.1.
UniGene	Os.3191.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q0IXT4.
Proteomic databases
PRIDE	Q0IXT4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4348566.
KEGG	osa:4348566.
Organism-specific databases
Gramene	Q0IXT4.
Phylogenomic databases
eggNOG	COG0016.
HOGENOM	HOG000230294.
KO	K01889.
ProtClustDB	PLN02853.
Gene expression databases
ArrayExpress	Q0IXT4.
Family and domain databases
InterPro	IPR006195. aa-tRNA-synth_II. IPR004529. Phe-tRNA-synth_IIc_asu. IPR002319. Phenylalanyl-tRNA_Synthase. [Graphical view]
Pfam	PF01409. tRNA-synt_2d. 1 hit. [Graphical view]
TIGRFAMs	TIGR00468. pheS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0IXT4_ORYSJ

Accession

Primary (citable) accession number: Q0IXT4

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2006
Last sequence update:	October 3, 2006
Last modified:	April 3, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)