Reviewed,
UniProtKB/Swiss-Prot Q0IQJ7 (MAN8_ORYSJ)
Last modified
November 3, 2009.
Version 25.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Mannan endo-1,4-beta-mannosidase 8 EC=3.2.1.78 Alternative name(s): Beta-mannanase 8 Endo-beta-1,4-mannanase 8 OsMAN8 | ||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) | ||||
| Taxonomic identifier | 39947 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 372 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | Random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans. |
| Tissue specificity | Expressed in stems and leaves and seeds. Ref.4 |
| Sequence similarities | Belongs to the glycosyl hydrolase 5 (cellulase A) family. |
| Sequence caution | The sequence BAF29018.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Glycosidase Hydrolase |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | cation binding Inferred from electronic annotation. Source: InterPro mannan endo-1,4-beta-mannosidase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications." The rice chromosomes 11 and 12 sequencing consortia BMC Biol. 3:20-20(2005) [PubMed: 16188032] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [2] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [3] | "Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare. |
| [4] | "The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar." Yuan J.S., Yang X., Lai J., Lin H., Cheng Z.-M., Nonogaki H., Chen F. Funct. Integr. Genomics 7:1-16(2007) [PubMed: 16897088] [Abstract] Cited for: GENE FAMILY, TISSUE SPECIFICITY. |
Cross-references
Sequence databases | |
|---|---|
| DP000011 Genomic DNA. Translation: ABA95648.1. AP008218 Genomic DNA. Translation: BAF29018.1. Sequence problems. | |
| RefSeq | NP_001065999.1. |
| UniGene | Os.89197 |
3D structure databases | |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH5. Glycoside Hydrolase Family 5. |
Genome annotation databases | |
| GeneID | 4351332. |
| KEGG | osa:4351332. |
Organism-specific databases | |
| Gramene | Q2QYI9. |
Family and domain databases | |
| InterPro | IPR001547. Glyco_hydro_5. IPR018087. Glyco_hydro_5_CS. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view] |
| Gene3D | G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. |
| Pfam | PF00150. Cellulase. 1 hit. [Graphical view] |
| PROSITE | PS00659. GLYCOSYL_HYDROL_F5. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | MAN8_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q0IQJ7 Secondary accession number(s): Q2QYI9 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| SIMILARITY comments Index of protein domains and families |

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