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Q0IPF7

- Q0IPF7_ORYSJ

UniProt

Q0IPF7 - Q0IPF7_ORYSJ

Protein
Submitted name:

Os12g0207600 protein

Gene

Os12g0207600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (03 Oct 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: InterPro
    3. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro
    2. translation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Os12g0207600 proteinImported
    Gene namesi
    Ordered Locus Names:Os12g0207600Imported
    OrganismiOryza sativa subsp. japonica (Rice)Imported
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 12

    Organism-specific databases

    GrameneiQ0IPF7.

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: InterPro

    PTM / Processingi

    Proteomic databases

    PRIDEiQ0IPF7.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0IPF7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    KOiK01601.

    Family and domain databases

    Gene3Di1.10.287.10. 1 hit.
    3.20.20.110. 2 hits.
    3.30.70.150. 1 hit.
    HAMAPiMF_01343_B. Ribosomal_S15_B.
    InterProiIPR000589. Ribosomal_S15.
    IPR005290. Ribosomal_S15_bac-type.
    IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    IPR009068. S15_NS1_RNA-bd.
    [Graphical view]
    PfamiPF00312. Ribosomal_S15. 1 hit.
    PF00016. RuBisCO_large. 2 hits.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF47060. SSF47060. 1 hit.
    SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    TIGRFAMsiTIGR00952. S15_bact. 1 hit.
    PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
    PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0IPF7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSPQTETKAN VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP    50
    EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV VGEDNQYIAY 100
    VAYPLDLFEE GFVTNMFTSI VGNIFGFKAL RALRLEDLRI PPTYSKTFQG 150
    PPHGIQVERD KLNKYDRPLL GCTIKPKLGL SAKNYGRACY ECLRGGLDFT 200
    KDDENVNSQP FMRWRDRFVF CAEAIYKSQA ETGEIKGHYL NATAGDSPQI 250
    LVWLIIAATT AYFFTFTEQC MQLLIDRKIM DWVSMPGVIP VASGGIHVWH 300
    MPALTEIFGD DSVLQFGGGT LGHPWGNAPG AAANRVALEA CVQARNEGRD 350
    LAREACKWSP ELAAACEIWK VIKFEFEPYL QKKYYEPRCR GFESLLAHSL 400
    PKGKGLYFPP EGRKTMIGIA DVKLLNLEKY MKKKGGRKFF GFMVKEEKEE 450
    NWGSVEFQVF SFTNKIRRLA SHLELHKKDF SSERGLRRLL GKRQRLLAYL 500
    AKKNRVRYKK LISQLDIREW 520
    Length:520
    Mass (Da):59,032
    Last modified:October 3, 2006 - v1
    Checksum:iF385D981B806607C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008218 Genomic DNA. Translation: BAF29408.1.
    RefSeqiNP_001066389.1. NM_001072921.1.

    Genome annotation databases

    GeneIDi4351758.
    KEGGiosa:4351758.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008218 Genomic DNA. Translation: BAF29408.1 .
    RefSeqi NP_001066389.1. NM_001072921.1.

    3D structure databases

    ProteinModelPortali Q0IPF7.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q0IPF7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4351758.
    KEGGi osa:4351758.

    Organism-specific databases

    Gramenei Q0IPF7.

    Phylogenomic databases

    KOi K01601.

    Family and domain databases

    Gene3Di 1.10.287.10. 1 hit.
    3.20.20.110. 2 hits.
    3.30.70.150. 1 hit.
    HAMAPi MF_01343_B. Ribosomal_S15_B.
    InterProi IPR000589. Ribosomal_S15.
    IPR005290. Ribosomal_S15_bac-type.
    IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    IPR009068. S15_NS1_RNA-bd.
    [Graphical view ]
    Pfami PF00312. Ribosomal_S15. 1 hit.
    PF00016. RuBisCO_large. 2 hits.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47060. SSF47060. 1 hit.
    SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    TIGRFAMsi TIGR00952. S15_bact. 1 hit.
    PROSITEi PS00362. RIBOSOMAL_S15. 1 hit.
    PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. NipponbareImported.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. NipponbareImported.

    Entry informationi

    Entry nameiQ0IPF7_ORYSJ
    AccessioniPrimary (citable) accession number: Q0IPF7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2006
    Last sequence update: October 3, 2006
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3