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Protein
Submitted name:

Os12g0207600 protein

Gene

Os12g0207600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro
  3. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
  2. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Os12g0207600 proteinImported
Gene namesi
Ordered Locus Names:Os12g0207600Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 12

Organism-specific databases

GrameneiQ0IPF7.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ0IPF7.

Structurei

3D structure databases

ProteinModelPortaliQ0IPF7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

InParanoidiQ0IPF7.
KOiK01601.

Family and domain databases

Gene3Di1.10.287.10. 1 hit.
3.20.20.110. 2 hits.
3.30.70.150. 1 hit.
HAMAPiMF_01343_B. Ribosomal_S15_B.
InterProiIPR000589. Ribosomal_S15.
IPR005290. Ribosomal_S15_bac-type.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]
PfamiPF00312. Ribosomal_S15. 1 hit.
PF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsiTIGR00952. S15_bact. 1 hit.
PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0IPF7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPQTETKAN VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP
60 70 80 90 100
EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV VGEDNQYIAY
110 120 130 140 150
VAYPLDLFEE GFVTNMFTSI VGNIFGFKAL RALRLEDLRI PPTYSKTFQG
160 170 180 190 200
PPHGIQVERD KLNKYDRPLL GCTIKPKLGL SAKNYGRACY ECLRGGLDFT
210 220 230 240 250
KDDENVNSQP FMRWRDRFVF CAEAIYKSQA ETGEIKGHYL NATAGDSPQI
260 270 280 290 300
LVWLIIAATT AYFFTFTEQC MQLLIDRKIM DWVSMPGVIP VASGGIHVWH
310 320 330 340 350
MPALTEIFGD DSVLQFGGGT LGHPWGNAPG AAANRVALEA CVQARNEGRD
360 370 380 390 400
LAREACKWSP ELAAACEIWK VIKFEFEPYL QKKYYEPRCR GFESLLAHSL
410 420 430 440 450
PKGKGLYFPP EGRKTMIGIA DVKLLNLEKY MKKKGGRKFF GFMVKEEKEE
460 470 480 490 500
NWGSVEFQVF SFTNKIRRLA SHLELHKKDF SSERGLRRLL GKRQRLLAYL
510 520
AKKNRVRYKK LISQLDIREW
Length:520
Mass (Da):59,032
Last modified:October 3, 2006 - v1
Checksum:iF385D981B806607C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008218 Genomic DNA. Translation: BAF29408.1.
RefSeqiNP_001066389.1. NM_001072921.1.

Genome annotation databases

GeneIDi4351758.
KEGGiosa:4351758.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008218 Genomic DNA. Translation: BAF29408.1.
RefSeqiNP_001066389.1. NM_001072921.1.

3D structure databases

ProteinModelPortaliQ0IPF7.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ0IPF7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi4351758.
KEGGiosa:4351758.

Organism-specific databases

GrameneiQ0IPF7.

Phylogenomic databases

InParanoidiQ0IPF7.
KOiK01601.

Family and domain databases

Gene3Di1.10.287.10. 1 hit.
3.20.20.110. 2 hits.
3.30.70.150. 1 hit.
HAMAPiMF_01343_B. Ribosomal_S15_B.
InterProiIPR000589. Ribosomal_S15.
IPR005290. Ribosomal_S15_bac-type.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]
PfamiPF00312. Ribosomal_S15. 1 hit.
PF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsiTIGR00952. S15_bact. 1 hit.
PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NipponbareImported.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. NipponbareImported.

Entry informationi

Entry nameiQ0IPF7_ORYSJ
AccessioniPrimary (citable) accession number: Q0IPF7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: January 7, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.