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Q0INM3

- BGA15_ORYSJ

UniProt

Q0INM3 - BGA15_ORYSJ

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Protein

Beta-galactosidase 15

Gene
Os12g0429200, LOC_Os12g24170
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei220 – 2201Proton donor Reviewed prediction
Active sitei289 – 2891Nucleophile Reviewed prediction

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidase 15 (EC:3.2.1.23)
Short name:
Lactase 15
Gene namesi
Ordered Locus Names:Os12g0429200, LOC_Os12g24170
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 12

Organism-specific databases

GrameneiQ0INM3.

Subcellular locationi

Secretedextracellular spaceapoplast Reviewed prediction

GO - Cellular componenti

  1. apoplast Source: UniProtKB-SubCell
  2. plant-type cell wall Source: EnsemblPlants/Gramene
  3. vacuolar membrane Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131 Reviewed predictionAdd
BLAST
Chaini32 – 919888Beta-galactosidase 15PRO_0000294167Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi63 – 631N-linked (GlcNAc...) Reviewed prediction
Glycosylationi412 – 4121N-linked (GlcNAc...) Reviewed prediction
Glycosylationi530 – 5301N-linked (GlcNAc...) Reviewed prediction
Glycosylationi546 – 5461N-linked (GlcNAc...) Reviewed prediction
Glycosylationi855 – 8551N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein

Proteomic databases

PRIDEiQ0INM3.

Structurei

3D structure databases

ProteinModelPortaliQ0INM3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini822 – 90786SUEL-type lectinAdd
BLAST

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG1874.
HOGENOMiHOG000239919.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0INM3-1 [UniParc]FASTAAdd to Basket

« Hide

MAASRGPPLL GFRALALALL LAILLLLGCS AAAAYAGAEG VLRQVVGRRG    50
DDGGGGNFFE PFNVTYDHRA VLIGGKRRML VSAGLHYPRA TPEMWPSLIA 100
KCKEGGADVI ETYVFWNGHE PAKGQYYFEE RFDLVKFAKL VAAEGLFLFL 150
RIGPYACAEW NFGGFPVWLR DIPGIEFRTD NEPFKAEMQT FVTKIVTLMK 200
EEKLYSWQGG PIILQQIENE YGNIQGNYGQ AGKRYMQWAA QMAIGLDTGI 250
PWVMCRQTDA PEEIIDTCNA FYCDGFKPNS YNKPTIWTED WDGWYADWGG 300
ALPHRPAEDS AFAVARFYQR GGSLQNYYMY FGGTNFARTA GGPLQITSYD 350
YDAPIDEYGI LRQPKWGHLK DLHTAIKLCE PALIAVDGSP QYIKLGSMQE 400
AHVYSTGEVH TNGSMAGNAQ ICSAFLANID EHKYASVWIF GKSYSLPPWS 450
VSILPDCENV AFNTARIGAQ TSVFTVESGS PSRSSRHKPS ILSLTSGGPY 500
LSSTWWTSKE TIGTWGGNNF AVQGILEHLN VTKDISDYLW YTTRVNISDA 550
DVAFWSSKGV LPSLTIDKIR DVARVFVNGK LAGSQVGHWV SLKQPIQLVE 600
GLNELTLLSE IVGLQNYGAF LEKDGAGFRG QVTLTGLSDG DVDLTNSLWT 650
YQVGLKGEFS MIYAPEKQGC AGWSRMQKDS VQPFTWYKTM FSTPKGTDPV 700
AIDLGSMGKG QAWVNGHLIG RYWSLVAPES GCSSSCYYPG AYNERKCQSN 750
CGMPTQNWYH IPREWLKESD NLLVLFEETG GDPSLISLEA HYAKTVCSRI 800
SENYYPPLSA WSHLSSGRAS VNAATPELRL QCDDGHVISE ITFASYGTPS 850
GGCLNFSKGN CHASSTLDLV TEACVGNTKC AISVSNDVFG DPCRGVLKDL 900
AVEAKCSPPS TTKEPRGEM 919
Length:919
Mass (Da):101,006
Last modified:October 3, 2006 - v1
Checksum:i84C4826B18470736
GO

Sequence cautioni

The sequence ABA97655.2 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DP000011 Genomic DNA. Translation: ABA97655.2. Sequence problems.
AP008218 Genomic DNA. Translation: BAF29692.1.
AK065546 mRNA. No translation available.
RefSeqiNP_001066673.1. NM_001073205.1.
UniGeneiOs.52193.

Genome annotation databases

EnsemblPlantsiOS12T0429200-01; OS12T0429200-01; OS12G0429200.
GeneIDi4352110.
KEGGiosa:4352110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DP000011 Genomic DNA. Translation: ABA97655.2 . Sequence problems.
AP008218 Genomic DNA. Translation: BAF29692.1 .
AK065546 mRNA. No translation available.
RefSeqi NP_001066673.1. NM_001073205.1.
UniGenei Os.52193.

3D structure databases

ProteinModelPortali Q0INM3.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH35. Glycoside Hydrolase Family 35.

Proteomic databases

PRIDEi Q0INM3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS12T0429200-01 ; OS12T0429200-01 ; OS12G0429200 .
GeneIDi 4352110.
KEGGi osa:4352110.

Organism-specific databases

Gramenei Q0INM3.

Phylogenomic databases

eggNOGi COG1874.
HOGENOMi HOG000239919.

Family and domain databases

Gene3Di 2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view ]
PANTHERi PTHR23421. PTHR23421. 1 hit.
Pfami PF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view ]
PRINTSi PR00742. GLHYDRLASE35.
SUPFAMi SSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
    The rice chromosomes 11 and 12 sequencing consortia
    BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiBGA15_ORYSJ
AccessioniPrimary (citable) accession number: Q0INM3
Secondary accession number(s): Q2QSG5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: October 3, 2006
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi