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Q0INM3

- BGA15_ORYSJ

UniProt

Q0INM3 - BGA15_ORYSJ

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Protein

Beta-galactosidase 15

Gene

Os12g0429200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei220 – 2201Proton donorSequence Analysis
Active sitei289 – 2891NucleophileSequence Analysis

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. carbohydrate metabolic process Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH35. Glycoside Hydrolase Family 35.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidase 15 (EC:3.2.1.23)
Short name:
Lactase 15
Gene namesi
Ordered Locus Names:Os12g0429200, LOC_Os12g24170
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 12

Organism-specific databases

GrameneiQ0INM3.

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: UniProtKB-KW
  2. plant-type cell wall Source: EnsemblPlants/Gramene
  3. vacuolar membrane Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131Sequence AnalysisAdd
BLAST
Chaini32 – 919888Beta-galactosidase 15PRO_0000294167Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi63 – 631N-linked (GlcNAc...)Sequence Analysis
Glycosylationi412 – 4121N-linked (GlcNAc...)Sequence Analysis
Glycosylationi530 – 5301N-linked (GlcNAc...)Sequence Analysis
Glycosylationi546 – 5461N-linked (GlcNAc...)Sequence Analysis
Glycosylationi855 – 8551N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PRIDEiQ0INM3.

Structurei

3D structure databases

ProteinModelPortaliQ0INM3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini822 – 90786SUEL-type lectinPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 35 family.Curated
Contains 1 SUEL-type lectin domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG1874.
HOGENOMiHOG000239919.
InParanoidiQ0INM3.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0INM3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAASRGPPLL GFRALALALL LAILLLLGCS AAAAYAGAEG VLRQVVGRRG
60 70 80 90 100
DDGGGGNFFE PFNVTYDHRA VLIGGKRRML VSAGLHYPRA TPEMWPSLIA
110 120 130 140 150
KCKEGGADVI ETYVFWNGHE PAKGQYYFEE RFDLVKFAKL VAAEGLFLFL
160 170 180 190 200
RIGPYACAEW NFGGFPVWLR DIPGIEFRTD NEPFKAEMQT FVTKIVTLMK
210 220 230 240 250
EEKLYSWQGG PIILQQIENE YGNIQGNYGQ AGKRYMQWAA QMAIGLDTGI
260 270 280 290 300
PWVMCRQTDA PEEIIDTCNA FYCDGFKPNS YNKPTIWTED WDGWYADWGG
310 320 330 340 350
ALPHRPAEDS AFAVARFYQR GGSLQNYYMY FGGTNFARTA GGPLQITSYD
360 370 380 390 400
YDAPIDEYGI LRQPKWGHLK DLHTAIKLCE PALIAVDGSP QYIKLGSMQE
410 420 430 440 450
AHVYSTGEVH TNGSMAGNAQ ICSAFLANID EHKYASVWIF GKSYSLPPWS
460 470 480 490 500
VSILPDCENV AFNTARIGAQ TSVFTVESGS PSRSSRHKPS ILSLTSGGPY
510 520 530 540 550
LSSTWWTSKE TIGTWGGNNF AVQGILEHLN VTKDISDYLW YTTRVNISDA
560 570 580 590 600
DVAFWSSKGV LPSLTIDKIR DVARVFVNGK LAGSQVGHWV SLKQPIQLVE
610 620 630 640 650
GLNELTLLSE IVGLQNYGAF LEKDGAGFRG QVTLTGLSDG DVDLTNSLWT
660 670 680 690 700
YQVGLKGEFS MIYAPEKQGC AGWSRMQKDS VQPFTWYKTM FSTPKGTDPV
710 720 730 740 750
AIDLGSMGKG QAWVNGHLIG RYWSLVAPES GCSSSCYYPG AYNERKCQSN
760 770 780 790 800
CGMPTQNWYH IPREWLKESD NLLVLFEETG GDPSLISLEA HYAKTVCSRI
810 820 830 840 850
SENYYPPLSA WSHLSSGRAS VNAATPELRL QCDDGHVISE ITFASYGTPS
860 870 880 890 900
GGCLNFSKGN CHASSTLDLV TEACVGNTKC AISVSNDVFG DPCRGVLKDL
910
AVEAKCSPPS TTKEPRGEM
Length:919
Mass (Da):101,006
Last modified:October 3, 2006 - v1
Checksum:i84C4826B18470736
GO

Sequence cautioni

The sequence ABA97655.2 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA. Translation: ABA97655.2. Sequence problems.
AP008218 Genomic DNA. Translation: BAF29692.1.
AK065546 mRNA. No translation available.
RefSeqiNP_001066673.1. NM_001073205.1.
UniGeneiOs.52193.

Genome annotation databases

EnsemblPlantsiOS12T0429200-01; OS12T0429200-01; OS12G0429200.
GeneIDi4352110.
KEGGiosa:4352110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA. Translation: ABA97655.2 . Sequence problems.
AP008218 Genomic DNA. Translation: BAF29692.1 .
AK065546 mRNA. No translation available.
RefSeqi NP_001066673.1. NM_001073205.1.
UniGenei Os.52193.

3D structure databases

ProteinModelPortali Q0INM3.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH35. Glycoside Hydrolase Family 35.

Proteomic databases

PRIDEi Q0INM3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS12T0429200-01 ; OS12T0429200-01 ; OS12G0429200 .
GeneIDi 4352110.
KEGGi osa:4352110.

Organism-specific databases

Gramenei Q0INM3.

Phylogenomic databases

eggNOGi COG1874.
HOGENOMi HOG000239919.
InParanoidi Q0INM3.

Family and domain databases

Gene3Di 2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view ]
PANTHERi PTHR23421. PTHR23421. 1 hit.
Pfami PF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view ]
PRINTSi PR00742. GLHYDRLASE35.
SUPFAMi SSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
    The rice chromosomes 11 and 12 sequencing consortia
    BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiBGA15_ORYSJ
AccessioniPrimary (citable) accession number: Q0INM3
Secondary accession number(s): Q2QSG5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: October 3, 2006
Last modified: October 29, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3