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Q0INM3 (BGA15_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-galactosidase 15

Short name=Lactase 15
EC=3.2.1.23
Gene names
Ordered Locus Names:Os12g0429200, LOC_Os12g24170
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length919 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Subcellular location

Secretedextracellular spaceapoplast Potential.

Sequence similarities

Belongs to the glycosyl hydrolase 35 family.

Contains 1 SUEL-type lectin domain.

Sequence caution

The sequence ABA97655.2 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Cellular componentApoplast
Secreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentapoplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

plant-type cell wall

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

vacuolar membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

carbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential
Chain32 – 919888Beta-galactosidase 15
PRO_0000294167

Regions

Domain822 – 90786SUEL-type lectin

Sites

Active site2201Proton donor Potential
Active site2891Nucleophile Potential

Amino acid modifications

Glycosylation631N-linked (GlcNAc...) Potential
Glycosylation4121N-linked (GlcNAc...) Potential
Glycosylation5301N-linked (GlcNAc...) Potential
Glycosylation5461N-linked (GlcNAc...) Potential
Glycosylation8551N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q0INM3 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 84C4826B18470736

FASTA919101,006
        10         20         30         40         50         60 
MAASRGPPLL GFRALALALL LAILLLLGCS AAAAYAGAEG VLRQVVGRRG DDGGGGNFFE 

        70         80         90        100        110        120 
PFNVTYDHRA VLIGGKRRML VSAGLHYPRA TPEMWPSLIA KCKEGGADVI ETYVFWNGHE 

       130        140        150        160        170        180 
PAKGQYYFEE RFDLVKFAKL VAAEGLFLFL RIGPYACAEW NFGGFPVWLR DIPGIEFRTD 

       190        200        210        220        230        240 
NEPFKAEMQT FVTKIVTLMK EEKLYSWQGG PIILQQIENE YGNIQGNYGQ AGKRYMQWAA 

       250        260        270        280        290        300 
QMAIGLDTGI PWVMCRQTDA PEEIIDTCNA FYCDGFKPNS YNKPTIWTED WDGWYADWGG 

       310        320        330        340        350        360 
ALPHRPAEDS AFAVARFYQR GGSLQNYYMY FGGTNFARTA GGPLQITSYD YDAPIDEYGI 

       370        380        390        400        410        420 
LRQPKWGHLK DLHTAIKLCE PALIAVDGSP QYIKLGSMQE AHVYSTGEVH TNGSMAGNAQ 

       430        440        450        460        470        480 
ICSAFLANID EHKYASVWIF GKSYSLPPWS VSILPDCENV AFNTARIGAQ TSVFTVESGS 

       490        500        510        520        530        540 
PSRSSRHKPS ILSLTSGGPY LSSTWWTSKE TIGTWGGNNF AVQGILEHLN VTKDISDYLW 

       550        560        570        580        590        600 
YTTRVNISDA DVAFWSSKGV LPSLTIDKIR DVARVFVNGK LAGSQVGHWV SLKQPIQLVE 

       610        620        630        640        650        660 
GLNELTLLSE IVGLQNYGAF LEKDGAGFRG QVTLTGLSDG DVDLTNSLWT YQVGLKGEFS 

       670        680        690        700        710        720 
MIYAPEKQGC AGWSRMQKDS VQPFTWYKTM FSTPKGTDPV AIDLGSMGKG QAWVNGHLIG 

       730        740        750        760        770        780 
RYWSLVAPES GCSSSCYYPG AYNERKCQSN CGMPTQNWYH IPREWLKESD NLLVLFEETG 

       790        800        810        820        830        840 
GDPSLISLEA HYAKTVCSRI SENYYPPLSA WSHLSSGRAS VNAATPELRL QCDDGHVISE 

       850        860        870        880        890        900 
ITFASYGTPS GGCLNFSKGN CHASSTLDLV TEACVGNTKC AISVSNDVFG DPCRGVLKDL 

       910 
AVEAKCSPPS TTKEPRGEM 

« Hide

References

« Hide 'large scale' references
[1]"The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
The rice chromosomes 11 and 12 sequencing consortia
BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DP000011 Genomic DNA. Translation: ABA97655.2. Sequence problems.
AP008218 Genomic DNA. Translation: BAF29692.1.
AK065546 mRNA. No translation available.
RefSeqNP_001066673.1. NM_001073205.1.
UniGeneOs.52193.

3D structure databases

ProteinModelPortalQ0INM3.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH35. Glycoside Hydrolase Family 35.

Proteomic databases

PRIDEQ0INM3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS12T0429200-01; OS12T0429200-01; OS12G0429200.
GeneID4352110.
KEGGosa:4352110.

Organism-specific databases

GrameneQ0INM3.

Phylogenomic databases

eggNOGCOG1874.
HOGENOMHOG000239919.
ProtClustDBCLSN2688643.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProIPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERPTHR23421. PTHR23421. 1 hit.
PfamPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGA15_ORYSJ
AccessionPrimary (citable) accession number: Q0INM3
Secondary accession number(s): Q2QSG5
Entry history
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: October 3, 2006
Last modified: April 16, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries