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Q0IMG5 (MT4A_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Metallothionein-like protein 4A
Alternative name(s):
Class I metallothionein-like protein 4A
OsMT-I-4a
OsMT1b
Gene names
Name:MT4A
Ordered Locus Names:Os12g0570700, LOC_Os12g38270
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length78 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Metallothioneins have a high content of cysteine residues that bind various heavy metals.

Tissue specificity

Expressed in roots. Ref.5

Sequence similarities

Belongs to the metallothionein superfamily. Type 15 family.

Sequence caution

The sequence ABA99658.2 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   LigandMetal-binding
Metal-thiolate cluster
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 7878Metallothionein-like protein 4A
PRO_0000263059

Sequences

Sequence LengthMass (Da)Tools
Q0IMG5 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 4973599B9EBD717F

FASTA787,644
        10         20         30         40         50         60 
MSCCGGSCNC GSSCKCGSGC GNMYPDLAEK TTNTSATMVL GVAPAKEQFE GVGKAAESGE 

        70 
AAHGCSCGSS CKCNPCNC 

« Hide

References

« Hide 'large scale' references
[1]"The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
The rice chromosomes 11 and 12 sequencing consortia
BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[5]"Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.)."
Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.
J. Biochem. Mol. Biol. 39:595-606(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, TISSUE SPECIFICITY.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DP000011 Genomic DNA. Translation: ABA99658.2. Sequence problems.
AP008218 Genomic DNA. Translation: BAF30100.1.
AK103445 mRNA. No translation available.
RefSeqNP_001067081.1. NM_001073613.1.
UniGeneOs.9279.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS12T0570700-01; OS12T0570700-01; OS12G0570700.
GeneID4352580.
KEGGosa:4352580.

Organism-specific databases

GrameneQ0IMG5.

Phylogenomic databases

HOGENOMHOG000220916.

Family and domain databases

InterProIPR000347. Metalthion_15p.
[Graphical view]
PfamPF01439. Metallothio_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameMT4A_ORYSJ
AccessionPrimary (citable) accession number: Q0IMG5
Secondary accession number(s): Q2QNC6
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 3, 2006
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Metallothioneins

Classification of metallothioneins and list of entries