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Protein

Metallothionein-like protein 4A

Gene

MT4A

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Metallothioneins have a high content of cysteine residues that bind various heavy metals.Curated

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Metal-thiolate cluster

Names & Taxonomyi

Protein namesi
Recommended name:
Metallothionein-like protein 4A
Alternative name(s):
Class I metallothionein-like protein 4A
OsMT-I-4a
OsMT1b
Gene namesi
Name:MT4A
Ordered Locus Names:Os12g0570700, LOC_Os12g38270
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 12

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7878Metallothionein-like protein 4APRO_0000263059Add
BLAST

Proteomic databases

PaxDbiQ0IMG5.

Expressioni

Tissue specificityi

Expressed in roots.1 Publication

Inductioni

By iron deficiency in roots.1 Publication

Gene expression databases

ExpressionAtlasiQ0IMG5. baseline and differential.
GenevisibleiQ0IMG5. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os12g38270.1.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG410J5R6. Eukaryota.
ENOG410Z616. LUCA.
HOGENOMiHOG000220916.
InParanoidiQ0IMG5.
OMAiAGMHAFS.
OrthoDBiEOG0936118M.

Family and domain databases

InterProiIPR000347. Metalthion_15p.
[Graphical view]
PfamiPF01439. Metallothio_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0IMG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSCCGGSCNC GSSCKCGSGC GNMYPDLAEK TTNTSATMVL GVAPAKEQFE
60 70
GVGKAAESGE AAHGCSCGSS CKCNPCNC
Length:78
Mass (Da):7,644
Last modified:October 3, 2006 - v1
Checksum:i4973599B9EBD717F
GO

Sequence cautioni

The sequence ABA99658 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA. Translation: ABA99658.2. Sequence problems.
AP008218 Genomic DNA. Translation: BAF30100.1.
AP014968 Genomic DNA. Translation: BAT17737.1.
AK103445 mRNA. No translation available.
RefSeqiXP_015618461.1. XM_015762975.1.
UniGeneiOs.9279.

Genome annotation databases

EnsemblPlantsiOS12T0570700-01; OS12T0570700-01; OS12G0570700.
GeneIDi4352580.
GrameneiOS12T0570700-01; OS12T0570700-01; OS12G0570700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000011 Genomic DNA. Translation: ABA99658.2. Sequence problems.
AP008218 Genomic DNA. Translation: BAF30100.1.
AP014968 Genomic DNA. Translation: BAT17737.1.
AK103445 mRNA. No translation available.
RefSeqiXP_015618461.1. XM_015762975.1.
UniGeneiOs.9279.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os12g38270.1.

Proteomic databases

PaxDbiQ0IMG5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS12T0570700-01; OS12T0570700-01; OS12G0570700.
GeneIDi4352580.
GrameneiOS12T0570700-01; OS12T0570700-01; OS12G0570700.

Phylogenomic databases

eggNOGiENOG410J5R6. Eukaryota.
ENOG410Z616. LUCA.
HOGENOMiHOG000220916.
InParanoidiQ0IMG5.
OMAiAGMHAFS.
OrthoDBiEOG0936118M.

Gene expression databases

ExpressionAtlasiQ0IMG5. baseline and differential.
GenevisibleiQ0IMG5. OS.

Family and domain databases

InterProiIPR000347. Metalthion_15p.
[Graphical view]
PfamiPF01439. Metallothio_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMT4A_ORYSJ
AccessioniPrimary (citable) accession number: Q0IMG5
Secondary accession number(s): Q2QNC6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 3, 2006
Last modified: September 7, 2016
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Metallothioneins
    Classification of metallothioneins and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.