Q0IDD0 (Q0IDD0_SYNS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 38 EMBL ABI46314.1
EC=3.2.1.24 EMBL ABI46314.1

Gene names

Ordered Locus Names:

sync_0308

Organism

Synechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI46314.1

Taxonomic identifier

64471 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	1001 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABI46314.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	mannose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-mannosidase activity Inferred from electronic annotation. Source: EC carbohydrate binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0IDD0 [UniParc]. Last modified October 3, 2006. Version 1. Checksum: 4995160F32363695	FASTA	1,001	112,044
	10 20 30 40 50 60 MEKPLQAPGS EWIETFRCRS RVDLLPGWWR HGDQKRQPVL ADPWGRIHRP DWAERGLLIW 70 80 90 100 110 120 PRGGNWLHLE QTLICPQPWM QASSSCERLV LSWWADAVRL RIDGVLVHEG DLFDTRCRWL 130 140 150 160 170 180 LPEDWRDLSG LRIQLDLRSP CHDDGALIHS ALVQEPLIAQ CDTDRALLPE ALELSWARGE 190 200 210 220 230 240 SLPDAVLSCD PMASEAVALV DRHLAACPKP LGVVHWLGHA HLDLAWLWPV ADTWQAAVRT 250 260 270 280 290 300 FCSALDLMEC YPKLHFAHST PALYAWVERH RPALHARIQQ ASREGRWEPI NGPWVETDCV 310 320 330 340 350 360 LVSTASLSRQ FTLGQEDSQR RFPEWRHDLA WLPDSFGFAA GLPAVAVASG VRWFCTHKLA 370 380 390 400 410 420 WNATNRFPHR LFRWRSRGGA EVLALMLPGI GTDADPVAMA KEQRDFQSAT GVEQAIWLPG 430 440 450 460 470 480 VGDHGGGPTA EMLEQLCLWE QQPQAVAQQP GTLRAYLDHL EPWRSSLPVW RDELYLELHR 490 500 510 520 530 540 GCATSRPDQK RHNRSLERLL REAELSAALL GTRADALVPS HEQASDWRPL LFQQFHDILP 550 560 570 580 590 600 GTSIPEVFEQ AEPIWCEARR RAARCRDQLL GHLLASNQDG MASDPHRSRW TWCGLQPLAH 610 620 630 640 650 660 WSPLLRLPQG HWSSGGQILP VQAAPSGGVW VQLPCSEGVC ALPLRRSREP LGSAVPIRYP 670 680 690 700 710 720 VSVEVVSSGV WRLSNGAVSA DVSIHGLVQL RDGNGVPQLS EPMRLLRFSD RGEFWDAWDL 730 740 750 760 770 780 AADYRQHPLP MAERWSAELV ESGPLTARIV LRTVAGLSKV RLDLILQADS PWLEAQLSVQ 790 800 810 820 830 840 WQQTHELLRL ELPLNSPAVR WAADTSGGVI ERPAEAFTPY EQERWELPVI SWLAAEAEAP 850 860 870 880 890 900 GGGMAVLLDG PQGVDASPNH LGVSLLRGPT WPDPSADHGW HRHRLAFMPA LLGWNRSGVA 910 920 930 940 950 960 QAAIRFREPG WVGPVALEQR WQGLPSLPIG LVPISVRPAQ GAGLSGKAVQ IELLNPGPAR 970 980 990 1000 QRWLPGTDWR LSCAKSNDPR TFWEVKPGEL ITLILENVQS S

References

[1]

"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment." Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T. Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed: 16938853] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000435 Genomic DNA. Translation: ABI46314.1.
RefSeq	YP_729542.1. NC_008319.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q0IDD0.
Protein family/group databases
CAZy	GH38. Glycoside Hydrolase Family 38.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4259690.
GenomeReviews	Gene locus sync_0308 in contig CP000435_GR.
KEGG	syg:sync_0308.
PATRIC	23791470. VBISynSp88089_0317.
TIGR	sync_0308.
Phylogenomic databases
eggNOG	COG0383.
HOGENOM	HBG286952.
OMA	ELHRGCA.
PhylomeDB	Q0IDD0.
ProtClustDB	CLSK826224.
Family and domain databases
InterPro	IPR011013. Glyco_hydro-type_carb-bd. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR011682. Glyco_hydro_38_C. IPR015341. Glyco_hydro_38_cen_dom. IPR000602. Glyco_hydro_38_core. [Graphical view]
Gene3D	G3DSA:3.20.110.10. Glyco_hydro_38_core. 1 hit.
KO	K01191.
Pfam	PF09261. Alpha-mann_mid. 1 hit. PF01074. Glyco_hydro_38. 1 hit. PF07748. Glyco_hydro_38C. 1 hit. [Graphical view]
SMART	SM00872. Alpha-mann_mid. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0IDD0_SYNS3

Accession

Primary (citable) accession number: Q0IDD0

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2006
Last sequence update:	October 3, 2006
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)