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Q0ID96

- PYRB_SYNS3

UniProt

Q0ID96 - PYRB_SYNS3

Protein

Aspartate carbamoyltransferase

Gene

pyrB

Organism
Synechococcus sp. (strain CC9311)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (03 Oct 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Carbamoyl phosphate + L-aspartate = phosphate + N-carbamoyl-L-aspartate.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. amino acid binding Source: InterPro
    2. aspartate carbamoyltransferase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. 'de novo' pyrimidine nucleobase biosynthetic process Source: InterPro
    2. 'de novo' UMP biosynthetic process Source: UniProtKB-UniPathway
    3. cellular amino acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    Transferase

    Keywords - Biological processi

    Pyrimidine biosynthesis

    Enzyme and pathway databases

    BioCyciSSP64471:GIVP-343-MONOMER.
    UniPathwayiUPA00070; UER00116.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Aspartate carbamoyltransferaseUniRule annotation (EC:2.1.3.2UniRule annotation)
    Alternative name(s):
    Aspartate transcarbamylaseUniRule annotation
    Short name:
    ATCaseUniRule annotation
    Gene namesi
    Name:pyrBUniRule annotation
    Ordered Locus Names:sync_0343
    OrganismiSynechococcus sp. (strain CC9311)
    Taxonomic identifieri64471 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001961: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 349349Aspartate carbamoyltransferasePRO_0000301632Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi64471.sync_0343.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0ID96.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATCase/OTCase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0540.
    HOGENOMiHOG000022685.
    KOiK00609.
    OMAiMTLNAMR.
    OrthoDBiEOG61KBJZ.

    Family and domain databases

    Gene3Di3.40.50.1370. 2 hits.
    HAMAPiMF_00001. Asp_carb_tr.
    InterProiIPR006132. Asp/Orn_carbamoyltranf_P-bd.
    IPR006130. Asp/Orn_carbamoylTrfase.
    IPR002082. Asp_carbamoyltransf.
    IPR006131. Asp_carbamoyltransf_Asp/Orn-bd.
    [Graphical view]
    PfamiPF00185. OTCace. 1 hit.
    PF02729. OTCace_N. 1 hit.
    [Graphical view]
    PRINTSiPR00100. AOTCASE.
    PR00101. ATCASE.
    SUPFAMiSSF53671. SSF53671. 1 hit.
    TIGRFAMsiTIGR00670. asp_carb_tr. 1 hit.
    PROSITEiPS00097. CARBAMOYLTRANSFERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0ID96-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSGWSHRHVL DLASFSRDDY ATVLELAHRF RSMPVTGARK LPALQGRLVA    50
    TLFFEPSTRT RSSFELAAKR LSADVQSFSP SSSSLSKGES LLDTARTYVA 100
    MGADVLVIRH RCTDVPAQLA SELDQAGERT VVLNGGDGQH SHPSQGLLDL 150
    YTLAHHFDPR NSQLDALQGK RIVIVGDVVH SRVARSNLWA LSACGADVVL 200
    CGPPSLVPDA FAAFLDAPPP GQASDPVRER GTVQISRSLD DCLSGADAVM 250
    TLRLQKERMT DHLLTNLDRY HRDFGLTHER LRRCAFSGPV LHPGPVNRGV 300
    EMSGGLLDDR SICLVEDQVR NGIPIRMALL YLMAASDPVA ESSRASAPS 349
    Length:349
    Mass (Da):37,879
    Last modified:October 3, 2006 - v1
    Checksum:i7A59A091FD1C2CA9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000435 Genomic DNA. Translation: ABI46806.1.
    RefSeqiWP_011618317.1. NC_008319.1.
    YP_729576.1. NC_008319.1.

    Genome annotation databases

    EnsemblBacteriaiABI46806; ABI46806; sync_0343.
    GeneIDi4258954.
    KEGGisyg:sync_0343.
    PATRICi23791540. VBISynSp88089_0351.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000435 Genomic DNA. Translation: ABI46806.1 .
    RefSeqi WP_011618317.1. NC_008319.1.
    YP_729576.1. NC_008319.1.

    3D structure databases

    ProteinModelPortali Q0ID96.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 64471.sync_0343.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABI46806 ; ABI46806 ; sync_0343 .
    GeneIDi 4258954.
    KEGGi syg:sync_0343.
    PATRICi 23791540. VBISynSp88089_0351.

    Phylogenomic databases

    eggNOGi COG0540.
    HOGENOMi HOG000022685.
    KOi K00609.
    OMAi MTLNAMR.
    OrthoDBi EOG61KBJZ.

    Enzyme and pathway databases

    UniPathwayi UPA00070 ; UER00116 .
    BioCyci SSP64471:GIVP-343-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1370. 2 hits.
    HAMAPi MF_00001. Asp_carb_tr.
    InterProi IPR006132. Asp/Orn_carbamoyltranf_P-bd.
    IPR006130. Asp/Orn_carbamoylTrfase.
    IPR002082. Asp_carbamoyltransf.
    IPR006131. Asp_carbamoyltransf_Asp/Orn-bd.
    [Graphical view ]
    Pfami PF00185. OTCace. 1 hit.
    PF02729. OTCace_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00100. AOTCASE.
    PR00101. ATCASE.
    SUPFAMi SSF53671. SSF53671. 1 hit.
    TIGRFAMsi TIGR00670. asp_carb_tr. 1 hit.
    PROSITEi PS00097. CARBAMOYLTRANSFERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CC9311.

    Entry informationi

    Entry nameiPYRB_SYNS3
    AccessioniPrimary (citable) accession number: Q0ID96
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 11, 2007
    Last sequence update: October 3, 2006
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3