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Q0ICY8 (Q0ICY8_SYNS3) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL ABI47454.1
Gene names
Ordered Locus Names:sync_0455 EMBL ABI47454.1
OrganismSynechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI47454.1
Taxonomic identifier64471 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length443 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q0ICY8 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: A381535061A46F81

FASTA44349,948
        10         20         30         40         50         60 
MLTPLPKHHF PGEGREGNST VQLLREELLL DGNSKQNLAT FCQTYQAQSA MELMTLGVDK 

        70         80         90        100        110        120 
NLIDKDEYPQ TAELEGRCVS MMADLWNAPG AAVGCSTIGS SEAAMLGGMA AKWRWRKRRE 

       130        140        150        160        170        180 
AAGLPTDKPN MVCGSVQICW KKFARYWDIE MRELEMLTGE LCVSPERVLE AVDENTIFVV 

       190        200        210        220        230        240 
PTLGVTYHGL YEDIESISKA LDDLQARTGL DVPIHVDAAS GGFLAPFCAP DLPLWDFRLE 

       250        260        270        280        290        300 
RVKSINASGH KFGLAPLGVG WVLWRSQEDL PDELVFHVTY LGGDMPTFQI NFSRPAGQVI 

       310        320        330        340        350        360 
AQYHEFVRLG REGYRMLHMA SHANAQYFAE KLREMDLFRI IHDGTPDKGI PTVVWTLDDN 

       370        380        390        400        410        420 
PKYGFNLYDF ADRLRMRGWQ VPAYPFTGEL ESTAFQRILV KRDFTRDMAD LLLEDIRQAI 

       430        440 
QHFQKHPITS NLAATEGASY NHL 

« Hide

References

[1]"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment."
Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T.
Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CC9311 EMBL ABI47454.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000435 Genomic DNA. Translation: ABI47454.1.
RefSeqYP_729684.1. NC_008319.1.

3D structure databases

ProteinModelPortalQ0ICY8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING64471.sync_0455.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI47454; ABI47454; sync_0455.
GeneID4259991.
KEGGsyg:sync_0455.
PATRIC23791766. VBISynSp88089_0460.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAPTFQINF.
OrthoDBEOG6TFCPW.

Enzyme and pathway databases

BioCycSSP64471:GIVP-455-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0ICY8_SYNS3
AccessionPrimary (citable) accession number: Q0ICY8
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)