Q0ICY8 (Q0ICY8_SYNS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ABI47454.1
EC=4.1.1.15 EMBL ABI47454.1

Gene names

Ordered Locus Names:

sync_0455 EMBL ABI47454.1

Organism

Synechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI47454.1

Taxonomic identifier

64471 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechococcus

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ABI47454.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0ICY8 [UniParc]. Last modified October 3, 2006. Version 1. Checksum: A381535061A46F81	FASTA	443	49,948
	10 20 30 40 50 60 MLTPLPKHHF PGEGREGNST VQLLREELLL DGNSKQNLAT FCQTYQAQSA MELMTLGVDK 70 80 90 100 110 120 NLIDKDEYPQ TAELEGRCVS MMADLWNAPG AAVGCSTIGS SEAAMLGGMA AKWRWRKRRE 130 140 150 160 170 180 AAGLPTDKPN MVCGSVQICW KKFARYWDIE MRELEMLTGE LCVSPERVLE AVDENTIFVV 190 200 210 220 230 240 PTLGVTYHGL YEDIESISKA LDDLQARTGL DVPIHVDAAS GGFLAPFCAP DLPLWDFRLE 250 260 270 280 290 300 RVKSINASGH KFGLAPLGVG WVLWRSQEDL PDELVFHVTY LGGDMPTFQI NFSRPAGQVI 310 320 330 340 350 360 AQYHEFVRLG REGYRMLHMA SHANAQYFAE KLREMDLFRI IHDGTPDKGI PTVVWTLDDN 370 380 390 400 410 420 PKYGFNLYDF ADRLRMRGWQ VPAYPFTGEL ESTAFQRILV KRDFTRDMAD LLLEDIRQAI 430 440 QHFQKHPITS NLAATEGASY NHL

References

[1]

"Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment." Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T. Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CC9311 EMBL ABI47454.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000435 Genomic DNA. Translation: ABI47454.1.
RefSeq	YP_729684.1. NC_008319.1.
3D structure databases
ProteinModelPortal	Q0ICY8.
ModBase	Search...
Protein-protein interaction databases
STRING	64471.sync_0455.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABI47454; ABI47454; sync_0455.
GeneID	4259991.
KEGG	syg:sync_0455.
PATRIC	23791766. VBISynSp88089_0460.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	IELREVP.
ProtClustDB	CLSK646928.
Enzyme and pathway databases
BioCyc	SSP64471:GIVP-455-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0ICY8_SYNS3

Accession

Primary (citable) accession number: Q0ICY8

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2006
Last sequence update:	October 3, 2006
Last modified:	May 29, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)