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Protein

Glutamate decarboxylase

Gene

sync_0455

Organism
Synechococcus sp. (strain CC9311)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSSP64471:GIVP-455-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:sync_0455Imported
OrganismiSynechococcus sp. (strain CC9311)Imported
Taxonomic identifieri64471 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001961: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi64471.sync_0455.

Structurei

3D structure databases

ProteinModelPortaliQ0ICY8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0ICY8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTPLPKHHF PGEGREGNST VQLLREELLL DGNSKQNLAT FCQTYQAQSA
60 70 80 90 100
MELMTLGVDK NLIDKDEYPQ TAELEGRCVS MMADLWNAPG AAVGCSTIGS
110 120 130 140 150
SEAAMLGGMA AKWRWRKRRE AAGLPTDKPN MVCGSVQICW KKFARYWDIE
160 170 180 190 200
MRELEMLTGE LCVSPERVLE AVDENTIFVV PTLGVTYHGL YEDIESISKA
210 220 230 240 250
LDDLQARTGL DVPIHVDAAS GGFLAPFCAP DLPLWDFRLE RVKSINASGH
260 270 280 290 300
KFGLAPLGVG WVLWRSQEDL PDELVFHVTY LGGDMPTFQI NFSRPAGQVI
310 320 330 340 350
AQYHEFVRLG REGYRMLHMA SHANAQYFAE KLREMDLFRI IHDGTPDKGI
360 370 380 390 400
PTVVWTLDDN PKYGFNLYDF ADRLRMRGWQ VPAYPFTGEL ESTAFQRILV
410 420 430 440
KRDFTRDMAD LLLEDIRQAI QHFQKHPITS NLAATEGASY NHL
Length:443
Mass (Da):49,948
Last modified:October 3, 2006 - v1
Checksum:iA381535061A46F81
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000435 Genomic DNA. Translation: ABI47454.1.
RefSeqiWP_011618416.1. NC_008319.1.
YP_729684.1. NC_008319.1.

Genome annotation databases

EnsemblBacteriaiABI47454; ABI47454; sync_0455.
GeneIDi4259991.
KEGGisyg:sync_0455.
PATRICi23791766. VBISynSp88089_0460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000435 Genomic DNA. Translation: ABI47454.1.
RefSeqiWP_011618416.1. NC_008319.1.
YP_729684.1. NC_008319.1.

3D structure databases

ProteinModelPortaliQ0ICY8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi64471.sync_0455.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI47454; ABI47454; sync_0455.
GeneIDi4259991.
KEGGisyg:sync_0455.
PATRICi23791766. VBISynSp88089_0460.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciSSP64471:GIVP-455-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC9311Imported.

Entry informationi

Entry nameiQ0ICY8_SYNS3
AccessioniPrimary (citable) accession number: Q0ICY8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: February 4, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.