Q0ICN2 (Q0ICN2_SYNS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family protein EMBL ABI45950.1
EC=3.2.1.135 EMBL ABI45950.1

Gene names

Ordered Locus Names:

sync_0570

Organism

Synechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI45950.1

Taxonomic identifier

64471 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	485 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABI45950.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro neopullulanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0ICN2 [UniParc]. Last modified October 3, 2006. Version 1. Checksum: 17090E86C3A85773	FASTA	485	54,859
	10 20 30 40 50 60 MGSEACKGMA ETPRIGRFPA WVAEAVVYQV FPDRFRRSGR VEAQQGLSMQ PWGTEPVEHG 70 80 90 100 110 120 FQGGDLYGVI DALDHLQGLG VTCLYLTPVF SSAANHRYHT YNYLEVDPLL GGNQALDALI 130 140 150 160 170 180 AAVHQRGMRL ILDGVFNHCG RGFWAFHHLL ENGDSSPYRQ WFHVHQWPLR PYPGRGQACG 190 200 210 220 230 240 YSCWWNDPAL PKFNHDHAPV KDHLLAVGKY WLERGIDGWR LDVPDEVPSE FWMDFRRMVK 250 260 270 280 290 300 AVNPEAWIVG EIWGDARPWL QGEHFDGVMN YRLGWSSLCW VAGSRLRRRY HNPMYPLRPL 310 320 330 340 350 360 QTEALLEIWS ETQGWYAPEV NRCQLNLLDS HDVPRALHSL KGDVAALSLA LLMLMLQPGA 370 380 390 400 410 420 PCLYYGTEAG LEGGAEPDCR EAMPWEEPWP HDLCTMIKAL TKIRQQVEAL RECGLFWQAC 430 440 450 460 470 480 ASDGLIGRAP GVVVVVNRSR RKALLLESHD VPQVGWKTND ALIGTYQVAR HALGPQSAVL FKALR

References

[1]

"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment." Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T. Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed: 16938853] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000435 Genomic DNA. Translation: ABI45950.1.
RefSeq	YP_729790.1. NC_008319.1.
3D structure databases
ProteinModelPortal	Q0ICN2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0ICN2.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4260738.
GenomeReviews	Gene locus sync_0570 in contig CP000435_GR.
KEGG	syg:sync_0570.
PATRIC	23792012. VBISynSp88089_0577.
TIGR	sync_0570.
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG726713.
OMA	QPGAPCI.
PhylomeDB	Q0ICN2.
ProtClustDB	CLSK825845.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01234.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0ICN2_SYNS3

Accession

Primary (citable) accession number: Q0ICN2

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2006
Last sequence update:	October 3, 2006
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)