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Q0ICJ9 (Q0ICJ9_SYNS3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Deoxyribose-phosphate aldolase EMBL ABI46012.1
EC=4.1.2.4 EMBL ABI46012.1
Gene names
Name:deoC EMBL ABI46012.1
Ordered Locus Names:sync_0605
OrganismSynechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI46012.1
Taxonomic identifier64471 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length226 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABI46012.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processdeoxyribonucleotide catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functiondeoxyribose-phosphate aldolase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0ICJ9 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 9846CD664E2CBD35

FASTA22623,804
        10         20         30         40         50         60 
MTASPRQREL PELPPFIHQA VLDPLLEEEA LHNLCDAGRL LGFGGLCTSL CHLEAVRNRI 

        70         80         90        100        110        120 
GPSGRLRLFA VVDFPFGTIP AELKRAQAEW AAARGADALD VVPNLAAITA GRAETYAEEL 

       130        140        150        160        170        180 
AQICDLGLPV TVILDVNRLQ PEQLSLAVEA AIDAGASCLQ AGNGFGAATT PLQVRKLKEL 

       190        200        210        220 
ARGNCAIKAA GGIQRLDSAL DLMEEGATAL GTSHGPALIQ ALRHPQ

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References

[1]"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment."
Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T.
Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed: 16938853] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000435 Genomic DNA. Translation: ABI46012.1.
RefSeqYP_729823.1. NC_008319.1.

3D structure databases

ProteinModelPortalQ0ICJ9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0ICJ9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4261209.
GenomeReviewsGene locus sync_0605 in contig CP000435_GR.
KEGGsyg:sync_0605.
PATRIC23792084. VBISynSp88089_0611.
TIGRsync_0605.

Phylogenomic databases

eggNOGCOG0274.
HOGENOMHBG636421.
OMAEEKIAMC.
PhylomeDBQ0ICJ9.
ProtClustDBCLSK957672.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/AroFGH_arch.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01619.
PfamPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFPIRSF001357. DeoC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0ICJ9_SYNS3
AccessionPrimary (citable) accession number: Q0ICJ9
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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