Q0IC87 (Q0IC87_SYNS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycine--tRNA ligase alpha subunit HAMAP MF_00254
EC=6.1.1.14 HAMAP MF_00254

Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254

Gene names

Name:	glyQ HAMAP MF_00254
Ordered Locus Names:	sync_0717

Organism

Synechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI46474.1

Taxonomic identifier

64471 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	305 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254
Subunit structure	Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254
Subcellular location	Cytoplasm By similarity HAMAP MF_00254.
Sequence similarities	Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00254

Ontologies

Keywords
Biological process	Protein biosynthesis HAMAP MF_00254
Cellular component	Cytoplasm HAMAP MF_00254
Ligand	ATP-binding HAMAP MF_00254 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase HAMAP MF_00254 EMBL ABI46474.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycyl-tRNA aminoacylation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP glycine-tRNA ligase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0IC87 [UniParc]. Last modified October 3, 2006. Version 1. Checksum: 0BDE72030C891605	FASTA	305	34,248
	10 20 30 40 50 60 MSADKAPSTH FQDIISTLNR FWGEQGCVLL QPYDTEKGAG TMSPHTVLRA IGPEPWAVAY 70 80 90 100 110 120 PEPCRRPTDG RYGDNPNRAQ HYFQYQVLIK PSPDGIQETY LASLAALGIC AADHDIRFVE 130 140 150 160 170 180 DNWESPTLGA WGVGWEVWLD GMEVTQFTYF QQCGGIDCKP VSIEITYGLE RLAMYLQDVE 190 200 210 220 230 240 SIWDLSWNEE RSYGDIWLPF EKGQCQFNFE ASNPDRLKQL FAIYEAEAAD LIEQNLPAPA 250 260 270 280 290 300 LDFVLKCSHT FNLLEARGVI SVTERTATIG RIRNLARKVA EAWLAEREAL GFPLLQPIAA AAGDH

References

[1]

"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment." Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T. Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed: 16938853] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000435 Genomic DNA. Translation: ABI46474.1.
RefSeq	YP_729935.1. NC_008319.1.
3D structure databases
ProteinModelPortal	Q0IC87.
SMR	Q0IC87. Positions 10-284.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0IC87.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4259156.
GenomeReviews	Gene locus sync_0717 in contig CP000435_GR.
KEGG	syg:sync_0717.
PATRIC	23792336. VBISynSp88089_0737.
TIGR	sync_0717.
Phylogenomic databases
eggNOG	COG0752.
HOGENOM	HBG285316.
OMA	CRRPTDG.
PhylomeDB	Q0IC87.
ProtClustDB	PRK09348.
Family and domain databases
HAMAP	MF_00254. Gly_tRNA_synth_alpha. [Tree]
InterPro	IPR006194. Gly-tRNA-synth_II_heterodimer. IPR002310. Gly-tRNA_synth_IIc_asu. [Graphical view]
KO	K01878.
Pfam	PF02091. tRNA-synt_2e. 1 hit. [Graphical view]
PRINTS	PR01044. TRNASYNTHGA.
TIGRFAMs	TIGR00388. GlyQ. 1 hit.
PROSITE	PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0IC87_SYNS3

Accession

Primary (citable) accession number: Q0IC87

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2006
Last sequence update:	October 3, 2006
Last modified:	January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)