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Q0IBR0 (Q0IBR0_SYNS3) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type EMBL ABI46761.1
EC=5.2.1.8 EMBL ABI46761.1
Gene names
Ordered Locus Names:sync_0899
OrganismSynechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI46761.1
Taxonomic identifier64471 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length237 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL ABI46761.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processprotein folding

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionpeptidyl-prolyl cis-trans isomerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0IBR0 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: C8F2B87CF95AD40A

FASTA23725,456
        10         20         30         40         50         60 
MIFPFMLRSI MRTLLSLAVC LPLLVGCSQS NTASTASVPS GCSQASSPCL QGKAEVELMT 

        70         80         90        100        110        120 
TRGAVKLELD GDAAPVTAGN FVDLVKRGVY DGTVFHRVIR EPVPFVVQGG DPASSDPSTL 

       130        140        150        160        170        180 
KSQYGQGSFI DPDSGQARFI PLELSYQSED QPRYSRQSTN PSDLQQLKLS HERGAVAMAR 

       190        200        210        220        230 
SQSPDSASAQ FYMALKPLPE LDGRYAVFGR VTDGLDVVDA IEQDDKLLKA KLLTPGL

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References

[1]"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment."
Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T.
Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed: 16938853] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000435 Genomic DNA. Translation: ABI46761.1.
RefSeqYP_730112.1. NC_008319.1.

3D structure databases

ProteinModelPortalQ0IBR0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0IBR0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4258928.
GenomeReviewsGene locus sync_0899 in contig CP000435_GR.
KEGGsyg:sync_0899.
PATRIC23792742. VBISynSp88089_0935.
TIGRsync_0899.

Phylogenomic databases

eggNOGCOG0652.
HOGENOMHBG610621.
OMAQPFVVQG.
PhylomeDBQ0IBR0.
ProtClustDBCLSK826084.

Family and domain databases

InterProIPR002130. Cyclophilin-like_PPIase_dom.
[Graphical view]
Gene3DG3DSA:2.40.100.10. PPIase_cyclophilin. 2 hits.
KOK03768.
PfamPF00160. Pro_isomerase. 1 hit.
[Graphical view]
PRINTSPR00153. CSAPPISMRASE.
SUPFAMSSF50891. CSA_PPIase. 1 hit.
PROSITEPS50072. CSA_PPIASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0IBR0_SYNS3
AccessionPrimary (citable) accession number: Q0IBR0
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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