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Q0IA87 (Q0IA87_SYNS3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
3-dehydroquinate synthase HAMAP MF_00110
EC=4.2.3.4 HAMAP MF_00110
Gene names
Name:aroB HAMAP MF_00110
Ordered Locus Names:sync_1430
OrganismSynechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI47071.1
Taxonomic identifier64471 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length377 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate = 3-dehydroquinate + phosphate. HAMAP MF_00110

Cofactor

Divalent metal cations By similarity. HAMAP MF_00110

NAD By similarity. HAMAP MF_00110

Pathway

Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 2/7. HAMAP MF_00110

Subunit structure

Monomer By similarity. HAMAP MF_00110

Subcellular location

Cytoplasm By similarity HAMAP MF_00110.

Sequence similarities

Belongs to the dehydroquinate synthase family. HAMAP MF_00110

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Aromatic amino acid biosynthesis HAMAP MF_00110
   Cellular componentCytoplasm HAMAP MF_00110
   LigandNAD HAMAP MF_00110
   Molecular functionLyase HAMAP MF_00110 EMBL ABI47071.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processaromatic amino acid family biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular function3-dehydroquinate synthase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0IA87 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 7DAC7951FFB620F2

FASTA37740,323
        10         20         30         40         50         60 
MIQSQPSTTA SAELRRLSVA LERNPYDVVI TAGGIDHLGT ELLRLGIREH TKILVVSNAD 

        70         80         90        100        110        120 
VATHYGSRCL NSLEQAGFQS TLLTIPAGEE QKTLNTFSTI LDAAKEKGLE RQSLMLALGG 

       130        140        150        160        170        180 
GIVGDMTGFA AACWLRGIGV VQVPTTLLAM VDAAIGGKTG VNHPSGKNLI GAFHQPRLVM 

       190        200        210        220        230        240 
IDPDTLQTLP AREFRAGLAE VIKYGVIGDS DLFELLERSV SFDSPLSISK ELLATMLERS 

       250        260        270        280        290        300 
AQAKADVVAA DEKEGGQRAI LNYGHTFGHV VETLTGYGTW LHGEAVAIGM VAVAALAVQR 

       310        320        330        340        350        360 
GVMAQSDAER QTRLIKSAGL PSQWPDLNPD LVLKTLQGDK KVRNGRLRFV LPSSIGVVSI 

       370 
VDDVTHEEIR ACLASMR

« Hide

References

[1]"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment."
Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T.
Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed: 16938853] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000435 Genomic DNA. Translation: ABI47071.1.
RefSeqYP_730635.1. NC_008319.1.

3D structure databases

ProteinModelPortalQ0IA87.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0IA87.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4260884.
GenomeReviewsGene locus sync_1430 in contig CP000435_GR.
KEGGsyg:sync_1430.
PATRIC23793872. VBISynSp88089_1493.
TIGRsync_1430.

Phylogenomic databases

eggNOGCOG0337.
HOGENOMHBG632303.
OMAGTFTQPD.
PhylomeDBQ0IA87.
ProtClustDBPRK00002.

Family and domain databases

HAMAPMF_00110. DHQ_synthase.
[Tree]
InterProIPR016037. DHQ_synth_AroB.
[Graphical view]
KOK01735.
PANTHERPTHR21090:SF1. DHQ_synth_AroB. 1 hit.
PIRSFPIRSF001455. DHQ_synth. 1 hit.
TIGRFAMsTIGR01357. AroB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0IA87_SYNS3
AccessionPrimary (citable) accession number: Q0IA87
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info