Q0I9W7 (Q0I9W7_SYNS3) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 44.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Glutamate racemase HAMAP MF_00258 EC=5.1.1.3 HAMAP MF_00258 | ||||
| Gene names |
| ||||
| Organism | Synechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI46457.1 | ||||
| Taxonomic identifier | 64471 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Cyanobacteria › Chroococcales › Synechococcus |
Protein attributes
| Sequence length | 263 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942 |
| Catalytic activity | L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942 |
| Pathway | Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942 |
| Sequence similarities | Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell shape Cell wall biogenesis/degradation HAMAP MF_00258 SAAS SAAS015942 Peptidoglycan synthesis HAMAP MF_00258 SAAS SAAS015942 |
| Molecular function | Isomerase HAMAP MF_00258 SAAS SAAS015942 EMBL ABI46457.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic processInferred from electronic annotation. Source: HAMAP regulation of cell shapeInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | glutamate racemase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequences
| ||||||||||||||||||
References
| [1] | "Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment." Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T. Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed: 16938853] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000435 Genomic DNA. Translation: ABI46457.1. |
| RefSeq | YP_730755.1. NC_008319.1. |
3D structure databases | |
| ProteinModelPortal | Q0I9W7. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q0I9W7. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4259053. |
| GenomeReviews | Gene locus sync_1550 in contig CP000435_GR. |
| KEGG | syg:sync_1550. |
| PATRIC | 23794130. VBISynSp88089_1622. |
| TIGR | sync_1550. |
Phylogenomic databases | |
| eggNOG | COG0796. |
| HOGENOM | HBG645102. |
| OMA | TICSSIN. |
| PhylomeDB | Q0I9W7. |
| ProtClustDB | CLSK825886. |
Family and domain databases | |
| HAMAP | MF_00258. Glu_racemase. [Tree] |
| InterPro | IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR018187. Asp/Glu_racemase_AS. IPR004391. Glu_race. [Graphical view] |
| Gene3D | G3DSA:3.40.50.1860. Asp/Glu_race. 1 hit. |
| KO | K01776. |
| PANTHER | PTHR21198. PTHR21198. 1 hit. |
| Pfam | PF01177. Asp_Glu_race. 1 hit. [Graphical view] |
| SUPFAM | SSF53681. Asp/Glu_race. 2 hits. |
| TIGRFAMs | TIGR00067. Glut_race. 1 hit. |
| PROSITE | PS00924. ASP_GLU_RACEMASE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q0I9W7_SYNS3 | ||||||||
| Accession | Primary (citable) accession number: Q0I9W7 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with