Q0I997 (Q0I997_SYNS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Copper/zinc superoxide dismutase EMBL ABI46068.1

Gene names

Name:	sodC EMBL ABI46068.1
Ordered Locus Names:	sync_1771

Organism

Synechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI46068.1

Taxonomic identifier

64471 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechococcus

Protein attributes

Sequence length	175 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0I997 [UniParc]. Last modified October 3, 2006. Version 1. Checksum: 0B410366E8D8F98D	FASTA	175	17,859
	10 20 30 40 50 60 MYRLGALLAL CLALLMPATV QASTIEVTIN SINTEGIGES IGTISARDTD QGLVIIPELS 70 80 90 100 110 120 GLSEGEHGFH LHAGDQCAPQ TNSEGASIAG LAALGHWDPD QTNTHLGPFG NGHRGDLSRL 130 140 150 160 170 VVDRDGNTTT SVVAPRLKAS DLRGRALVVH AGGDTYSDTP PLGGGGARIA CGVGS

References

[1]

"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment." Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T. Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CC9311.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000435 Genomic DNA. Translation: ABI46068.1.
RefSeq	YP_730975.1. NC_008319.1.
3D structure databases
ProteinModelPortal	Q0I997.
ModBase	Search...
Protein-protein interaction databases
STRING	64471.sync_1771.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABI46068; ABI46068; sync_1771.
GeneID	4261052.
KEGG	syg:sync_1771.
PATRIC	23794588. VBISynSp88089_1850.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2032.
HOGENOM	HOG000263449.
KO	K04565.
OMA	NTNSHQG.
ProtClustDB	CLSK842311.
Family and domain databases
Gene3D	2.60.40.200. 1 hit.
InterPro	IPR024136. SOD_Cu/Zn. IPR024134. SOD_Cu/Zn_/chaperones. IPR001424. SOD_Cu_Zn_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit. PTHR10003:SF11. PTHR10003:SF11. 1 hit.
Pfam	PF00080. Sod_Cu. 1 hit. [Graphical view]
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0I997_SYNS3

Accession

Primary (citable) accession number: Q0I997

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2006
Last sequence update:	October 3, 2006
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)