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Q0I997 (Q0I997_SYNS3) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:sodC EMBL ABI46068.1
Ordered Locus Names:sync_1771 EMBL ABI46068.1
OrganismSynechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI46068.1
Taxonomic identifier64471 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length175 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processoxidation-reduction process

Inferred from electronic annotation. Source: InterPro

superoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0I997 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 0B410366E8D8F98D

FASTA17517,859
        10         20         30         40         50         60 
MYRLGALLAL CLALLMPATV QASTIEVTIN SINTEGIGES IGTISARDTD QGLVIIPELS 

        70         80         90        100        110        120 
GLSEGEHGFH LHAGDQCAPQ TNSEGASIAG LAALGHWDPD QTNTHLGPFG NGHRGDLSRL 

       130        140        150        160        170 
VVDRDGNTTT SVVAPRLKAS DLRGRALVVH AGGDTYSDTP PLGGGGARIA CGVGS 

« Hide

References

[1]"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment."
Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T.
Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CC9311 EMBL ABI46068.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000435 Genomic DNA. Translation: ABI46068.1.
RefSeqYP_730975.1. NC_008319.1.

3D structure databases

ProteinModelPortalQ0I997.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING64471.sync_1771.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI46068; ABI46068; sync_1771.
GeneID4261052.
KEGGsyg:sync_1771.
PATRIC23794588. VBISynSp88089_1850.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2032.
HOGENOMHOG000263449.
KOK04565.
OMADHPKPLG.
OrthoDBEOG6K13RS.
ProtClustDBCLSK842311.

Enzyme and pathway databases

BioCycSSP64471:GIVP-1771-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0I997_SYNS3
AccessionPrimary (citable) accession number: Q0I997
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: January 22, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)