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Q0I6J2 (Q0I6J2_SYNS3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Biosynthetic arginine decarboxylase HAMAP MF_01417
Short name=ADC HAMAP MF_01417
EC=4.1.1.19 HAMAP MF_01417
Gene names
Name:speA HAMAP MF_01417
Ordered Locus Names:sync_2742
OrganismSynechococcus sp. (strain CC9311) [Complete proteome] [HAMAP] EMBL ABI46161.1
Taxonomic identifier64471 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length644 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the biosynthesis of agmatine from arginine By similarity. HAMAP MF_01417

Catalytic activity

L-arginine = agmatine + CO2. HAMAP MF_01417

Cofactor

Magnesium By similarity. HAMAP MF_01417

Pyridoxal phosphate By similarity. HAMAP MF_01417

Pathway

Amine and polyamine biosynthesis; agmatine biosynthesis; agmatine from L-arginine: step 1/1. HAMAP MF_01417

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. HAMAP MF_01417

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region287 – 29711Substrate-binding By similarity HAMAP MF_01417

Amino acid modifications

Modified residue1051N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01417

Sequences

Sequence LengthMass (Da)Tools
Q0I6J2 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 6D8FBC33F6C4BEC7

FASTA64471,411
        10         20         30         40         50         60 
MVLADSITWT GSDSAQLYGL ERWGDPYFSI NPRGHVSVQP RGDRGGSLDL MELVAGLQDR 

        70         80         90        100        110        120 
SLGLPLLIRF DDILEDRLER LHAAFERAVT RYDYEGRYQG VFPVKCNQQR HVVEELVTCG 

       130        140        150        160        170        180 
RRWHFGLEAG SKAELLIALS LMDDPEALLI CNGYKDQRYI ETAILARRLG RRPVVVIEQP 

       190        200        210        220        230        240 
DEVQRIIDAS QELGAAPLIG IRARLSSRST GRWGSSVGDK AKFGLPAPEI IGAVEALRDA 

       250        260        270        280        290        300 
NLLSELRLLH FHVGSQINDI VVVKDALQEA SRLYVELHAL GAPMGYLDVG GGLGIDYDGS 

       310        320        330        340        350        360 
RTATAASTNY SLQNYANDVV ATVKEGCEPN NVPVPTLISE SGRAIASHFS VLVFNVLGSG 

       370        380        390        400        410        420 
GLQQPTPPIE RDEPLIVRNL RETLQGIEAL PTETPVDPSR LQEAWNDALK FKEDALAAFR 

       430        440        450        460        470        480 
LGYLSLKERS MAEQLTWACA RALLDRLHDV AKLPDDLKTL PAVLAETYYA NLSIFRSAPD 

       490        500        510        520        530        540 
TWAIQQLFPV MPLHRLNEQP TRLGHFADLT CDSDGKLNRF INDGQNKPLL ELHQLKLNEP 

       550        560        570        580        590        600 
YLIGMFLGGA YQEVMGNLHN LFGSTDAAHI RLAPGGDYQV DHVVRGDTNA DVLEMMEHDP 

       610        620        630        640 
DQLLERLRMA SEKAISSGQL RISEARRLMD HLEISLHQST YLQG

« Hide

References

[1]"Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment."
Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T.
Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) [PubMed: 16938853] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000435 Genomic DNA. Translation: ABI46161.1.
RefSeqYP_731930.1. NC_008319.1.

3D structure databases

ProteinModelPortalQ0I6J2.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0I6J2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4260382.
GenomeReviewsGene locus sync_2742 in contig CP000435_GR.
KEGGsyg:sync_2742.
PATRIC23796612. VBISynSp88089_2847.
TIGRsync_2742.

Phylogenomic databases

eggNOGCOG1166.
HOGENOMHBG321436.
OMALICNGYK.
PhylomeDBQ0I6J2.
ProtClustDBPRK05354.

Family and domain databases

HAMAPMF_01417. SpeA.
[Tree]
InterProIPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
[Graphical view]
KOK01585.
PANTHERPTHR11482:SF3. Arg_decrbxlase. 1 hit.
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PIRSFPIRSF001336. Arg_decrbxlase. 1 hit.
PRINTSPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
TIGRFAMsTIGR01273. SpeA. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0I6J2_SYNS3
AccessionPrimary (citable) accession number: Q0I6J2
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info