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Q0I4Q9

- Q0I4Q9_HISS1

UniProt

Q0I4Q9 - Q0I4Q9_HISS1

Protein
Submitted name:

NAD-dependent DNA ligase

Gene

ligA

Organism
Histophilus somni (strain 129Pt) (Haemophilus somnus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (03 Oct 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciHSOM205914:GJ7V-1380-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    NAD-dependent DNA ligaseImported
    Gene namesi
    Name:ligAImported
    Ordered Locus Names:HS_1324Imported
    OrganismiHistophilus somni (strain 129Pt) (Haemophilus somnus)Imported
    Taxonomic identifieri205914 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHistophilus
    ProteomesiUP000001970: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi205914.HS_1324.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0I4Q9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0I4Q9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRVLALFFML FIIKVQATLP DFMLLENYKN QDVSGWVMSE KLDGIRGYWD    50
    GKQLFTRQNK VIQPPHYFIR DFPPFAIDGE LFTERNQFEK ISSIVRSKKD 100
    KGWEKMKLYV FDVPNAQGNL FERLAVLQDY LDKHPTPYIQ IIEQIPIKTK 150
    QQVKNFLQQI EKQQGEGVVL RNPHATYERK RSTQILKLKT ALDEECTVIA 200
    HHQGKGQFEN MLGSISCQNH RGIFKIGSGF NLIERRNPPP IGSIITYKYR 250
    GLTKNGLPRF ATYWRSKKE 269
    Length:269
    Mass (Da):31,486
    Last modified:October 3, 2006 - v1
    Checksum:i1742DE6793794A06
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000436 Genomic DNA. Translation: ABI25599.1.
    RefSeqiYP_719536.1. NC_008309.1.

    Genome annotation databases

    EnsemblBacteriaiABI25599; ABI25599; HS_1324.
    GeneIDi4240836.
    KEGGihso:HS_1324.
    PATRICi20282745. VBIHaeSom53361_1392.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000436 Genomic DNA. Translation: ABI25599.1 .
    RefSeqi YP_719536.1. NC_008309.1.

    3D structure databases

    ProteinModelPortali Q0I4Q9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 205914.HS_1324.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABI25599 ; ABI25599 ; HS_1324 .
    GeneIDi 4240836.
    KEGGi hso:HS_1324.
    PATRICi 20282745. VBIHaeSom53361_1392.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci HSOM205914:GJ7V-1380-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Haemophilus somnus (Histophilus somni) strain 129Pt and comparison to Haemophilus ducreyi 35000HP and Haemophilus influenzae Rd."
      Challacombe J.F., Duncan A.J., Brettin T.S., Bruce D., Chertkov O., Detter J.C., Han C.S., Misra M., Richardson P., Tapia R., Thayer N., Xie G., Inzana T.J.
      J. Bacteriol. 189:1890-1898(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 129PtImported.

    Entry informationi

    Entry nameiQ0I4Q9_HISS1
    AccessioniPrimary (citable) accession number: Q0I4Q9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2006
    Last sequence update: October 3, 2006
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3