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Q0I4Q9

- Q0I4Q9_HISS1

UniProt

Q0I4Q9 - Q0I4Q9_HISS1

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Protein
Submitted name:

NAD-dependent DNA ligase

Gene
ligA, HS_1324
Organism
Histophilus somni (strain 129Pt) (Haemophilus somnus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciHSOM205914:GJ7V-1380-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
NAD-dependent DNA ligaseImported
Gene namesi
Name:ligAImported
Ordered Locus Names:HS_1324Imported
OrganismiHistophilus somni (strain 129Pt) (Haemophilus somnus)Imported
Taxonomic identifieri205914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHistophilus
ProteomesiUP000001970: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi205914.HS_1324.

Structurei

3D structure databases

ProteinModelPortaliQ0I4Q9.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0I4Q9-1 [UniParc]FASTAAdd to Basket

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MRVLALFFML FIIKVQATLP DFMLLENYKN QDVSGWVMSE KLDGIRGYWD    50
GKQLFTRQNK VIQPPHYFIR DFPPFAIDGE LFTERNQFEK ISSIVRSKKD 100
KGWEKMKLYV FDVPNAQGNL FERLAVLQDY LDKHPTPYIQ IIEQIPIKTK 150
QQVKNFLQQI EKQQGEGVVL RNPHATYERK RSTQILKLKT ALDEECTVIA 200
HHQGKGQFEN MLGSISCQNH RGIFKIGSGF NLIERRNPPP IGSIITYKYR 250
GLTKNGLPRF ATYWRSKKE 269
Length:269
Mass (Da):31,486
Last modified:October 3, 2006 - v1
Checksum:i1742DE6793794A06
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000436 Genomic DNA. Translation: ABI25599.1.
RefSeqiYP_719536.1. NC_008309.1.

Genome annotation databases

EnsemblBacteriaiABI25599; ABI25599; HS_1324.
GeneIDi4240836.
KEGGihso:HS_1324.
PATRICi20282745. VBIHaeSom53361_1392.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000436 Genomic DNA. Translation: ABI25599.1 .
RefSeqi YP_719536.1. NC_008309.1.

3D structure databases

ProteinModelPortali Q0I4Q9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 205914.HS_1324.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABI25599 ; ABI25599 ; HS_1324 .
GeneIDi 4240836.
KEGGi hso:HS_1324.
PATRICi 20282745. VBIHaeSom53361_1392.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci HSOM205914:GJ7V-1380-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Haemophilus somnus (Histophilus somni) strain 129Pt and comparison to Haemophilus ducreyi 35000HP and Haemophilus influenzae Rd."
    Challacombe J.F., Duncan A.J., Brettin T.S., Bruce D., Chertkov O., Detter J.C., Han C.S., Misra M., Richardson P., Tapia R., Thayer N., Xie G., Inzana T.J.
    J. Bacteriol. 189:1890-1898(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 129Pt.

Entry informationi

Entry nameiQ0I4Q9_HISS1
AccessioniPrimary (citable) accession number: Q0I4Q9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: June 11, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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