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Q0I4Q9 (Q0I4Q9_HISS1) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ligA EMBL ABI25599.1
Ordered Locus Names:HS_1324 EMBL ABI25599.1
OrganismHistophilus somni (strain 129Pt) (Haemophilus somnus) [Complete proteome] [HAMAP] EMBL ABI25599.1
Taxonomic identifier205914 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHistophilus

Protein attributes

Sequence length269 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q0I4Q9 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 1742DE6793794A06

FASTA26931,486
        10         20         30         40         50         60 
MRVLALFFML FIIKVQATLP DFMLLENYKN QDVSGWVMSE KLDGIRGYWD GKQLFTRQNK 

        70         80         90        100        110        120 
VIQPPHYFIR DFPPFAIDGE LFTERNQFEK ISSIVRSKKD KGWEKMKLYV FDVPNAQGNL 

       130        140        150        160        170        180 
FERLAVLQDY LDKHPTPYIQ IIEQIPIKTK QQVKNFLQQI EKQQGEGVVL RNPHATYERK 

       190        200        210        220        230        240 
RSTQILKLKT ALDEECTVIA HHQGKGQFEN MLGSISCQNH RGIFKIGSGF NLIERRNPPP 

       250        260 
IGSIITYKYR GLTKNGLPRF ATYWRSKKE 

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References

[1]"Complete genome sequence of Haemophilus somnus (Histophilus somni) strain 129Pt and comparison to Haemophilus ducreyi 35000HP and Haemophilus influenzae Rd."
Challacombe J.F., Duncan A.J., Brettin T.S., Bruce D., Chertkov O., Detter J.C., Han C.S., Misra M., Richardson P., Tapia R., Thayer N., Xie G., Inzana T.J.
J. Bacteriol. 189:1890-1898(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 129Pt.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000436 Genomic DNA. Translation: ABI25599.1.
RefSeqYP_719536.1. NC_008309.1.

3D structure databases

ProteinModelPortalQ0I4Q9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING205914.HS_1324.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI25599; ABI25599; HS_1324.
GeneID4240836.
KEGGhso:HS_1324.
PATRIC20282745. VBIHaeSom53361_1392.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000293070.
KOK01971.
OMAVRGYWDG.
OrthoDBEOG60919Q.
ProtClustDBPRK09125.

Enzyme and pathway databases

BioCycHSOM205914:GJ7V-1380-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0I4Q9_HISS1
AccessionPrimary (citable) accession number: Q0I4Q9
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: December 11, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)