Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q0I0C9 (SELD_SHESR) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Selenide, water dikinase
EC=2.7.9.3
Alternative name(s):
Selenium donor protein
Selenophosphate synthase
Gene names
Name:selD
Ordered Locus Names:Shewmr7_0170
OrganismShewanella sp. (strain MR-7) [Complete proteome] [HAMAP]
Taxonomic identifier60481 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length352 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625

Cofactor

Magnesium By similarity. HAMAP MF_00625

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily.

Ontologies

Keywords
   LigandATP-binding
Magnesium
Nucleotide-binding
Selenium
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

selenide, water dikinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 352352Selenide, water dikinase HAMAP MF_00625
PRO_1000051606

Regions

Nucleotide binding236 – 2427ATP Potential

Sites

Active site231 Potential
Site261Important for catalytic activity By similarity

Sequences

Sequence LengthMass (Da)Tools
Q0I0C9 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 36D13CE34A1243B1

FASTA35236,811
        10         20         30         40         50         60 
MSNSAVSSAD SIKLTEYSHG AGCGCKISPK VLTTILASQL PVFTDPNLLV GNQSRDDAAV 

        70         80         90        100        110        120 
YKLNDEIGII STTDFFMPIV DDPFTFGRIA ATNAISDIYA MGGTPMMAIA ILGWPVNKLP 

       130        140        150        160        170        180 
AEIAQQVVDG GRQACMEAGI MLAGGHSIDA PEPIFGLAVT GQIALTDLKQ NDTAKAGDRL 

       190        200        210        220        230        240 
YLTKPIGIGI LTTAQKQKKL KDEDSQIAVN AMCQLNSIGA KIAKITGVNA LTDVTGFGLA 

       250        260        270        280        290        300 
GHLLEVCQGA KLTAKLDLDS VPLLPRALDY LAQGCIPGGT HRNYDSYGEH LPALTDHQKA 

       310        320        330        340        350 
ILCDPQTSGG LLVAVSSEAE AELVALLNAH QIEPICIGSL ETPTSTANVV LC

« Hide

References

[1]"Complete sequence of chromosome 1 of Shewanella sp. MR-7."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nealson K., Konstantinidis K., Klappenbach J., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MR-7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000444 Genomic DNA. Translation: ABI41176.1.
RefSeqYP_736233.1. NC_008322.1.

3D structure databases

ProteinModelPortalQ0I0C9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0I0C9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4257558.
GenomeReviewsGene locus Shewmr7_0170 in contig CP000444_GR.
KEGGshm:Shewmr7_0170.
NMPDRfig|60481.10.peg.165.
PATRIC23585162. VBISheSp85603_0181.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0709.
HOGENOMHBG383791.
OMAMMAIAIL.
ProtClustDBPRK00943.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSELD_SHESR
AccessionPrimary (citable) accession number: Q0I0C9
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 3, 2006
Last modified: January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents