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Protein
Submitted name:

Aminotransferase

Gene

Shewmr7_1955

Organism
Shewanella sp. (strain MR-7)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSSP60481:GHW6-2052-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AminotransferaseImported (EC:2.6.1.-Imported)
Gene namesi
Ordered Locus Names:Shewmr7_1955Imported
OrganismiShewanella sp. (strain MR-7)Imported
Taxonomic identifieri60481 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001960 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ0HVB1.
SMRiQ0HVB1. Positions 2-397.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 393366Aminotran_1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000185899.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0HVB1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFSQVVLAP ADPILGLTDT FKADPRQDKV NLGVGIYKDE AGQTPVLQSV
60 70 80 90 100
KKAEALLLEQ EKTKNYLGIE GVQTYNHVVQ ELLFGEGSTL VTSGRAATAQ
110 120 130 140 150
APGGTGALRI AAEFLLRNTP SRTVWVSNPT WANHQNIFET AGLTVKEYGY
160 170 180 190 200
YNAAAHDIDF DAMMTDLANA LAGDIVLLHG CCHNPTGIDL TLAQWELVAN
210 220 230 240 250
LCADKQLVPL FDFAYQGFGA GIEEDAAGLR LVAAKVPELL VANSFSKNFG
260 270 280 290 300
LYNERIGAVT VVAQNADEAV RAFSQVKRTI RANYSNPPAH GALIVSTILS
310 320 330 340 350
DAALKALWVQ ELTEMRERIA EMRTLFVQSL KDEGVTQDFS FISRQNGMFS
360 370 380 390
FSGLNKAQVA RLKDEFGIYI VGSGRISVAG MTKTNMPVIC KAIAQVL
Length:397
Mass (Da):42,990
Last modified:October 3, 2006 - v1
Checksum:iC1E570F2F05139CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000444 Genomic DNA. Translation: ABI42944.1.
RefSeqiWP_011626148.1. NC_008322.1.

Genome annotation databases

EnsemblBacteriaiABI42944; ABI42944; Shewmr7_1955.
KEGGishm:Shewmr7_1955.
PATRICi23589009. VBISheSp85603_2016.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000444 Genomic DNA. Translation: ABI42944.1.
RefSeqiWP_011626148.1. NC_008322.1.

3D structure databases

ProteinModelPortaliQ0HVB1.
SMRiQ0HVB1. Positions 2-397.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI42944; ABI42944; Shewmr7_1955.
KEGGishm:Shewmr7_1955.
PATRICi23589009. VBISheSp85603_2016.

Phylogenomic databases

HOGENOMiHOG000185899.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Enzyme and pathway databases

BioCyciSSP60481:GHW6-2052-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-7Imported.

Entry informationi

Entry nameiQ0HVB1_SHESR
AccessioniPrimary (citable) accession number: Q0HVB1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: December 9, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.