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Protein
Submitted name:

Glycoside hydrolase, family 43

Gene

Shewmr7_1979

Organism
Shewanella sp. (strain MR-7)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolaseImported

Enzyme and pathway databases

BioCyciSSP60481:GHW6-2061-MONOMER.

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GH43. Glycoside Hydrolase Family 43.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase, family 43Imported
Gene namesi
Ordered Locus Names:Shewmr7_1979Imported
OrganismiShewanella sp. (strain MR-7)Imported
Taxonomic identifieri60481 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001960 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 30Sequence analysisAdd BLAST30
ChainiPRO_500417340231 – 634Sequence analysisAdd BLAST604

Structurei

3D structure databases

ProteinModelPortaliQ0HV87.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini374 – 539Ricin B-type lectinInterPro annotationAdd BLAST166

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000292041.
OMAiNGADPWL.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
InterProiView protein in InterPro
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_beta-prop.
IPR035992. Ricin_B-like_lectins.
IPR000772. Ricin_B_lectin.
PfamiView protein in Pfam
PF04616. Glyco_hydro_43. 1 hit.
PF14200. RicinB_lectin_2. 2 hits.
SUPFAMiSSF50370. SSF50370. 2 hits.
SSF75005. SSF75005. 1 hit.
PROSITEiView protein in PROSITE
PS50231. RICIN_B_LECTIN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0HV87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTHTINKRMA TLALAMGLSA TCLGAGNLHA AESAKDADEN RITAATFANP
60 70 80 90 100
LFRNGADPWL EYHNGNYYLT TTTWTSELVM RKSPTIAGLA DAPAHNIWSG
110 120 130 140 150
TDKSNCCNFW AFEFHPLQTA QGLRWYVIYT SGVAENFDGQ RNHILESEGS
160 170 180 190 200
DPMGPYKFKG TPMPDHWNID GSYLEYKGQL YFLWSEWHGQ DQVNLIAKMS
210 220 230 240 250
NPWTVEGEHK VITAPIHDWE KSGLNVNEGP EIIQHEGRTF LVHSASFCNT
260 270 280 290 300
EDYSLAVVEL TGDDPMDPAA WTKYDKPFFS KANGVYGPGH HGFFKSPDGK
310 320 330 340 350
EDWLIYHGNS SASDGCSGTR AARAQPFTWD NKGLPKFGEP MADKKQLPVP
360 370 380 390 400
SGEFGPITTQ VEGVKYRIVS REVGQCLVTN AKGQVSVGKC EDDNSQWVID
410 420 430 440 450
PSNDGLYRFA NVGQRTFLTQ AQCQDESSTA VNTAPWVASR CQRWSVDSTR
460 470 480 490 500
EGWFRFANDR SIGNLQAKNC SKKAGAEVIA GENRVSECTD WRIEPVSTFA
510 520 530 540 550
IVNAHSGRVV SAEQCQLKPN ANVAQFEYTG DACQQWQAMP TTDGFYRLQS
560 570 580 590 600
IQLSNNKAQQ CLVTNEGNLE LGACNAIDSE FRSELMPNGS LRLVSRKGGS
610 620 630
SMKVANGSYA NGDNIVEDVW KNTISRQFYF REVK
Length:634
Mass (Da):70,335
Last modified:October 3, 2006 - v1
Checksum:i2857021B926B22D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000444 Genomic DNA. Translation: ABI42968.1.
RefSeqiWP_011626161.1. NC_008322.1.

Genome annotation databases

EnsemblBacteriaiABI42968; ABI42968; Shewmr7_1979.
KEGGishm:Shewmr7_1979.

Similar proteinsi

Entry informationi

Entry nameiQ0HV87_SHESR
AccessioniPrimary (citable) accession number: Q0HV87
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: October 25, 2017
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported