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Protein

Extracellular exo-alpha-(1->5)-L-arabinofuranosidase

Gene

Shewmr7_1980

Organism
Shewanella sp. (strain MR-7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.UniRule annotation

Pathwayi: L-arabinan degradation

This protein is involved in the pathway L-arabinan degradation, which is part of Glycan metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway L-arabinan degradation and in Glycan metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei42Proton acceptorUniRule annotation1
Binding sitei42SubstrateUniRule annotation1
Binding sitei119Substrate; via amide nitrogenUniRule annotation1
Active sitei225Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotationImported, Hydrolase

Enzyme and pathway databases

BioCyciSSP60481:GHW6-2062-MONOMER.
UniPathwayiUPA00667.

Protein family/group databases

CAZyiGH43. Glycoside Hydrolase Family 43.

Names & Taxonomyi

Protein namesi
Recommended name:
Extracellular exo-alpha-(1->5)-L-arabinofuranosidaseUniRule annotation (EC:3.2.1.55UniRule annotation)
Gene namesi
Ordered Locus Names:Shewmr7_1980Imported
OrganismiShewanella sp. (strain MR-7)Imported
Taxonomic identifieri60481 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001960 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ0HV86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni159 – 162Substrate bindingUniRule annotation4
Regioni179 – 181Substrate bindingUniRule annotation3

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000292006.
KOiK06113.
OMAiGHLWAPD.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
InterProiView protein in InterPro
IPR006710. Glyco_hydro_43.
IPR016840. Glyco_hydro_43_endo_a_Ara-ase.
IPR023296. Glyco_hydro_beta-prop.
PfamiView protein in Pfam
PF04616. Glyco_hydro_43. 1 hit.
PIRSFiPIRSF026534. Endo_alpha-L-arabinosidase. 1 hit.
SUPFAMiSSF75005. SSF75005. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0HV86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAMRVTPKT ALKRHLKMLN CALLGVLGTL GQVSAKQVSI HDPVMAKEAG
60 70 80 90 100
QYYLFSTGPG ITYYSSKDKI HWELAGRVFE TEPSWAKGVA PEFNGHLWAP
110 120 130 140 150
DIIEHNGLFY LYYSVSAFGK NTSAIGVTVN KTLDKNSKDY QWTDKGIVIQ
160 170 180 190 200
SVPNRDAWNA IDPNIIVDEQ GTPWMSFGSF WQGLKLVKLN PDFISIAKPE
210 220 230 240 250
EWHTLAKLER PALLGETEPG PAEIEAPFIY KKDDYYYLFV SYGLCCRGDD
260 270 280 290 300
STYHLAVGRA KTVTGPYLDK EGKDMAQGGG SVLLHGTKAW PGLGHNSVYA
310 320 330 340 350
FDGKDYLVFH AYESADNGLQ KLKMAELSWR QGWPEVDPKA LNQYQSVLVA

PEGTK
Length:355
Mass (Da):39,490
Last modified:October 3, 2006 - v1
Checksum:i29B871CF8F24C2E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000444 Genomic DNA. Translation: ABI42969.1.
RefSeqiWP_011626162.1. NC_008322.1.

Genome annotation databases

EnsemblBacteriaiABI42969; ABI42969; Shewmr7_1980.
KEGGishm:Shewmr7_1980.

Similar proteinsi

Entry informationi

Entry nameiQ0HV86_SHESR
AccessioniPrimary (citable) accession number: Q0HV86
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: June 7, 2017
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported