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Q0HTI2 (Q0HTI2_SHESR) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Shewmr7_2588 EMBL ABI43573.1
OrganismShewanella sp. (strain MR-7) [Complete proteome] [HAMAP] EMBL ABI43573.1
Taxonomic identifier60481 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length549 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q0HTI2 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: D424606D8E43EF47

FASTA54960,928
        10         20         30         40         50         60 
MTQKLPRQAI ASEDSLMRIF TVPEDAESTL SIIEQKLSED LAGFLGDSIA ALEKPLSEIE 

        70         80         90        100        110        120 
TDFQAFEIPS QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG HMTSALPYFV LPLSKMMVGL 

       130        140        150        160        170        180 
NQNLVKIETS KAFTPLERQV LGMMHHLIYA QHDDFYRNWM HSANHSLGAF CSGGTVANIT 

       190        200        210        220        230        240 
ALWIARNQLL KADGDFKGVT REGLIKALRH YGFDDLAILV SERGHYSLGK AVDLLGIGRD 

       250        260        270        280        290        300 
NIISIPTDGN NKVDVAKMRE VAAELANKRI KIMAIVGVAG TTETGNIDPL RELAALASEL 

       310        320        330        340        350        360 
NCHFHVDAAW GGASLLSNKY RHLLDGIELA DSVTIDAHKQ MYVPMGAGMV LFKNPEFAHA 

       370        380        390        400        410        420 
IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFAE 

       430        440        450        460        470        480 
QIDAHPDFEL VTAPELCLLT YRYVPANVQA AMQLAIEQGY KTKLARFNEL LDGLTQFIQK 

       490        500        510        520        530        540 
HQREQGKSFV SRTRIQPARY FRQPTVVFRV VLANPLTSHE ILNQVLIEQG EIAALDKEFL 


PALLAMVNE 

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References

[1]"Complete sequence of chromosome 1 of Shewanella sp. MR-7."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nealson K., Konstantinidis K., Klappenbach J., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MR-7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000444 Genomic DNA. Translation: ABI43573.1.
RefSeqYP_738630.1. NC_008322.1.

3D structure databases

ProteinModelPortalQ0HTI2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING60481.Shewmr7_2588.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI43573; ABI43573; Shewmr7_2588.
GeneID4256670.
KEGGshm:Shewmr7_2588.
PATRIC23590351. VBISheSp85603_2671.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAARYFRQP.
OrthoDBEOG6MSRZP.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycSSP60481:GHW6-2704-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0HTI2_SHESR
AccessionPrimary (citable) accession number: Q0HTI2
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: November 13, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)