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Q0HM21 (Q0HM21_SHESM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Shewmr4_0816 EMBL ABI37896.1
OrganismShewanella sp. (strain MR-4) [Complete proteome] [HAMAP] EMBL ABI37896.1
Taxonomic identifier60480 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

FAD By similarity. RuleBase RU003892

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.

Sequences

Sequence LengthMass (Da)Tools
Q0HM21 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: BDF4C99636B03BF5

FASTA39644,109
        10         20         30         40         50         60 
MDKVGMSSYD IAIIGGGISG VGIAQYAAAA GYSTLLIEKG EIGGQTSANS SKLIHGGLRY 

        70         80         90        100        110        120 
LESGQVNLVR KSLQERRHLL DFAPSLVKPV PFYIPVYQDN QRNPWMIRAG LSLYALLSEF 

       130        140        150        160        170        180 
DPLGRFVSIP AVHWHRFNGL KLQGLKAVFQ YWDAQTDDKL LTQSVARSAE ALGAHVYAEA 

       190        200        210        220        230        240 
EFLQLNHLNE QIELSFRHRG EVQQIEAKLV INAAGPWVNE VIAKVTPPLA GAKIDWVQGA 

       250        260        270        280        290        300 
HLLLDLPAPD GILYLESCFD KRVIFVMPWY GQLLIGTTET ELTSLDMLPQ VTESEINYLL 

       310        320        330        340        350        360 
GIYRHYFPMS PSIDELKTKI VQTFCGVRVL PKQASSAFER PRETLMQTSI SHPRLLSLYG 

       370        380        390 
GKLTTFRSTS AEVLEWIEQK LGKRTPIADV DSLRLS 

« Hide

References

[1]"Complete sequence of Shewanella sp. MR-4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nealson K., Konstantinidis K., Klappenbach J., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MR-4 EMBL ABI37896.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000446 Genomic DNA. Translation: ABI37896.1.
RefSeqYP_732953.1. NC_008321.1.

3D structure databases

ProteinModelPortalQ0HM21.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING60480.Shewmr4_0816.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI37896; ABI37896; Shewmr4_0816.
GeneID4250748.
KEGGshe:Shewmr4_0816.
PATRIC23578100. VBISheSp133532_0847.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0578.
HOGENOMHOG000004811.
KOK00111.
OMATFCGVRV.
OrthoDBEOG651SR7.
ProtClustDBCLSK906039.

Enzyme and pathway databases

BioCycSSP60480:GI2N-845-MONOMER.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
PRINTSPR01001. FADG3PDH.
ProtoNetSearch...

Entry information

Entry nameQ0HM21_SHESM
AccessionPrimary (citable) accession number: Q0HM21
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: November 13, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)