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Q0HJ24 (Q0HJ24_SHESM) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glucan 1,4-alpha-glucosidase EMBL ABI38943.1
EC=3.2.1.3 EMBL ABI38943.1
Gene names
Ordered Locus Names:Shewmr4_1869
OrganismShewanella sp. (strain MR-4) [Complete proteome] [HAMAP] EMBL ABI38943.1
Taxonomic identifier60480 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length838 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 5050 Potential EMBL ABI38943.1
Chain51 – 838788 Potential EMBL ABI38943.1
PRO_5000129818

Sequences

Sequence LengthMass (Da)Tools
Q0HJ24 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: A96027C2091DDDC8

FASTA83891,011
        10         20         30         40         50         60 
MALTTVPSQQ ARSLTHRRNL TRKPIALAIA ASIIGVASLT GCSPSAPNAD TSTPTVTKAT 

        70         80         90        100        110        120 
DAQIAPGAPG KAPTWAFSGK TGIGTSYEPY TQGQYQDSIQ NPISRVWFSV AQGILTETMY 

       130        140        150        160        170        180 
GLIHNAQLKE LQFVITGNGF VDTEKDNTIS SIEYLDTDAN GRPQSLAYKI INRDVEGKYQ 

       190        200        210        220        230        240 
IEKHIFTDPD RDTLMMRVTF TAFEAGITPH LYVNPHIDNA GANDIGRIDH QALIARTADP 

       250        260        270        280        290        300 
HSSVMTVKSD IDFTQATTGF VGVSDGLADL GDNGKLDTLY QATSNAENPT QGNIAFTASY 

       310        320        330        340        350        360 
PVLQANQALN VNLAIGFGHD ETSSLANANA SLTAGYDKVL SQYNAGWHSY LHSLPAMPDM 

       370        380        390        400        410        420 
AQSTTDNGKL LYTSAMVLKA QEDKTYAGAL IASLSNPWGD TVPAVTPSTG YKAVWPRDFY 

       430        440        450        460        470        480 
QCAMAFLAMG DTQTPKVAFE YLKKVQVSDK TPGFSGTPGW FLQKTHVDGQ IEWVGVQLDQ 

       490        500        510        520        530        540 
TAMPIMLGWK LWQAGVLSQA ELSHWYQEML KAAADFLVSG GEVNLDWNHT QITPPKTQQE 

       550        560        570        580        590        600 
RWEEQAGYSP STTAAVIAGL VAASDIAKAV NDSDTSQRYL ATAKTLNQQL EKHLVTTQGL 

       610        620        630        640        650        660 
LTDSQGIKAP YYLRLSPNGE PNTAETLAAN NGRAGLDQRQ ILDGGFLELV RYGVRGATDK 

       670        680        690        700        710        720 
LINQSLALVD NTELEENLRL KYNFTAKDGS NVPGFRRYGN DGYGEDTLTG ANYAESGSNS 

       730        740        750        760        770        780 
DNQRGRVWPF FTGERGHFEL ALASAKGELT GTHAQQTKQQ LINTYVQGME TFANAGLMLP 

       790        800        810        820        830 
EQAWDGVGNA TRYQYQLGQG TNSATPLAWT HAEYIKLVRS MSDGRVWDNY PIVPEALK

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References

[1]"Complete sequence of Shewanella sp. MR-4."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nealson K., Konstantinidis K., Klappenbach J., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MR-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000446 Genomic DNA. Translation: ABI38943.1.
RefSeqYP_734000.1. NC_008321.1.

3D structure databases

ProteinModelPortalQ0HJ24.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0HJ24.

Protein family/group databases

CAZyGH15. Glycoside Hydrolase Family 15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4252443.
GenomeReviewsGene locus Shewmr4_1869 in contig CP000446_GR.
KEGGshe:Shewmr4_1869.
PATRIC23580404. VBISheSp133532_1944.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3387.
HOGENOMHBG290978.
OMARWEENAG.
ProtClustDBCLSK890895.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR006425. Glucoamylase_bac.
IPR015220. Glucodextran_N.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011613. Glyco_hydro_15.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
KOK01178.
PfamPF09137. Glucodextran_N. 1 hit.
PF00723. Glyco_hydro_15. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
TIGRFAMsTIGR01535. Glucan_glucosid. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0HJ24_SHESM
AccessionPrimary (citable) accession number: Q0HJ24
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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