Q0HIR2 (Q0HIR2_SHESM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 43 EMBL ABI39055.1

Gene names

Ordered Locus Names:

Shewmr4_1982

Organism

Shewanella sp. (strain MR-4) [Complete proteome] [HAMAP] EMBL ABI39055.1

Taxonomic identifier

60480 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	315 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABI39055.1
Molecular function	Hydrolase EMBL ABI39055.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 23	23	Potential EMBL ABI39055.1
	Chain	24 – 315	292	Potential EMBL ABI39055.1		PRO_5000129838

Sequences

	Sequence		Length	Mass (Da)
	Q0HIR2 [UniParc]. Last modified October 3, 2006. Version 1. Checksum: 502EAFF58743FE4D	FASTA	315	35,102
	10 20 30 40 50 60 MKKAFLSVCL ALSTSVSTAA IAANPLFTDV FTADPAAIVH QDTVYLYTGH DVAKDNRTFF 70 80 90 100 110 120 EMHDWLVFSS KDMHNWTAHG SKLSVKDFSW AKGDAWASHV IEKEGKFYWY VTARHNKING 130 140 150 160 170 180 FAIGVAVADS PLGPFKDARG SALITNDMTT DTEIDWDDID PAVFIDDDKQ AYLFWGNTKP 190 200 210 220 230 240 RFAKLKANMI ELDGPIHAID VPNFTEALWV HKKDKTYYLS YASGFPEKIA YATSDSILGP 250 260 270 280 290 300 WKYQGILNEV AGNSPTNHQA IIEFKGKSYF IYHTGASQDG GGEFRRSVAI DPLHYNADGT 310 LQRIHMTSEG ISEPQ

References

[1]

"Complete sequence of Shewanella sp. MR-4." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nealson K., Konstantinidis K., Klappenbach J., Tiedje J., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MR-4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000446 Genomic DNA. Translation: ABI39055.1.
RefSeq	YP_734112.1. NC_008321.1.
3D structure databases
ProteinModelPortal	Q0HIR2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0HIR2.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4252555.
GenomeReviews	Gene locus Shewmr4_1982 in contig CP000446_GR.
KEGG	she:Shewmr4_1982.
PATRIC	23580648. VBISheSp133532_2063.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG26186.
HOGENOM	HBG585375.
OMA	ALITNDM.
ProtClustDB	CLSK822159.
Family and domain databases
InterPro	IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0HIR2_SHESM

Accession

Primary (citable) accession number: Q0HIR2

Entry history

Integrated into UniProtKB/TrEMBL:	October 3, 2006
Last sequence update:	October 3, 2006
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)