Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q0HH76 (Q0HH76_SHESM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Shewmr4_2520 EMBL ABI39591.1
OrganismShewanella sp. (strain MR-4) [Complete proteome] [HAMAP] EMBL ABI39591.1
Taxonomic identifier60480 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length549 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q0HH76 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: AC1F657D80CDCCF3

FASTA54960,863
        10         20         30         40         50         60 
MTQKLPRQAT ASEDSLMRIF TVPEDAESTL SIIEQKLSED LAGFLGDSIA ALEKPLSEIE 

        70         80         90        100        110        120 
TDFQAFEIPS QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG HMTSALPYFV LPLSKMMVGL 

       130        140        150        160        170        180 
NQNLVKIETS KAFTPLERQV LGMMHHLIYA QNDDFYRNWM HSANHSLGAF CSGGTVANIT 

       190        200        210        220        230        240 
ALWIARNQLL KADGDFKGVT REGLIKALRH YGFDDLAILV SERGHYSLGK AVDLLGIGRD 

       250        260        270        280        290        300 
NIISIPTDGN NKVDVAKMRE VAAELANKRI KVMAIVGVAG TTETGNIDPL RELAALASEL 

       310        320        330        340        350        360 
NCHFHVDAAW GGASLLSNKY RHLLDGIELA DSVTIDAHKQ MYVPMGAGMV LFKNPEFAHA 

       370        380        390        400        410        420 
IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFAE 

       430        440        450        460        470        480 
QIDAHPDFEL VTAPELCLLT YRYVPSNVQA AMQLAIEQGD KTKLARYNEL LDGLTQFIQK 

       490        500        510        520        530        540 
HQREQGKSFV SRTRIQPARY FRQPTVVFRV VLANPLTSHE ILNQVLIEQG EIAALDKEFL 


PALLAMVNE 

« Hide

References

[1]"Complete sequence of Shewanella sp. MR-4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nealson K., Konstantinidis K., Klappenbach J., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MR-4 EMBL ABI39591.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000446 Genomic DNA. Translation: ABI39591.1.
RefSeqYP_734648.1. NC_008321.1.

3D structure databases

ProteinModelPortalQ0HH76.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING60480.Shewmr4_2520.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI39591; ABI39591; Shewmr4_2520.
GeneID4253091.
KEGGshe:Shewmr4_2520.
PATRIC23581794. VBISheSp133532_2612.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAARYFRQP.
OrthoDBEOG6MSRZP.

Enzyme and pathway databases

BioCycSSP60480:GI2N-2635-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0HH76_SHESM
AccessionPrimary (citable) accession number: Q0HH76
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)