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Q0HH76

- Q0HH76_SHESM

UniProt

Q0HH76 - Q0HH76_SHESM

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Shewmr4_2520

Organism
Shewanella sp. (strain MR-4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (03 Oct 2006)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSSP60480:GI2N-2635-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Shewmr4_2520Imported
    OrganismiShewanella sp. (strain MR-4)Imported
    Taxonomic identifieri60480 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000008079: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi60480.Shewmr4_2520.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0HH76.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiARYFRQP.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q0HH76-1 [UniParc]FASTAAdd to Basket

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    MTQKLPRQAT ASEDSLMRIF TVPEDAESTL SIIEQKLSED LAGFLGDSIA    50
    ALEKPLSEIE TDFQAFEIPS QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG 100
    HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHHLIYA 150
    QNDDFYRNWM HSANHSLGAF CSGGTVANIT ALWIARNQLL KADGDFKGVT 200
    REGLIKALRH YGFDDLAILV SERGHYSLGK AVDLLGIGRD NIISIPTDGN 250
    NKVDVAKMRE VAAELANKRI KVMAIVGVAG TTETGNIDPL RELAALASEL 300
    NCHFHVDAAW GGASLLSNKY RHLLDGIELA DSVTIDAHKQ MYVPMGAGMV 350
    LFKNPEFAHA IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG 400
    RDGYEILINN SLEKARYFAE QIDAHPDFEL VTAPELCLLT YRYVPSNVQA 450
    AMQLAIEQGD KTKLARYNEL LDGLTQFIQK HQREQGKSFV SRTRIQPARY 500
    FRQPTVVFRV VLANPLTSHE ILNQVLIEQG EIAALDKEFL PALLAMVNE 549
    Length:549
    Mass (Da):60,863
    Last modified:October 3, 2006 - v1
    Checksum:iAC1F657D80CDCCF3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000446 Genomic DNA. Translation: ABI39591.1.
    RefSeqiWP_011623272.1. NC_008321.1.
    YP_734648.1. NC_008321.1.

    Genome annotation databases

    EnsemblBacteriaiABI39591; ABI39591; Shewmr4_2520.
    GeneIDi4253091.
    KEGGishe:Shewmr4_2520.
    PATRICi23581794. VBISheSp133532_2612.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000446 Genomic DNA. Translation: ABI39591.1 .
    RefSeqi WP_011623272.1. NC_008321.1.
    YP_734648.1. NC_008321.1.

    3D structure databases

    ProteinModelPortali Q0HH76.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 60480.Shewmr4_2520.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABI39591 ; ABI39591 ; Shewmr4_2520 .
    GeneIDi 4253091.
    KEGGi she:Shewmr4_2520.
    PATRICi 23581794. VBISheSp133532_2612.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi ARYFRQP.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci SSP60480:GI2N-2635-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MR-4Imported.

    Entry informationi

    Entry nameiQ0HH76_SHESM
    AccessioniPrimary (citable) accession number: Q0HH76
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2006
    Last sequence update: October 3, 2006
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3