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Q0HG34

- Q0HG34_SHESM

UniProt

Q0HG34 - Q0HG34_SHESM

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Shewmr4_2912

Organism
Shewanella sp. (strain MR-4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (03 Oct 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSSP60480:GI2N-3030-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
    Gene namesi
    Ordered Locus Names:Shewmr4_2912Imported
    OrganismiShewanella sp. (strain MR-4)Imported
    Taxonomic identifieri60480 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000008079: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi60480.Shewmr4_2912.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0HG34.
    SMRiQ0HG34. Positions 4-420.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK07250.
    OMAiAMCAFEV.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0HG34-1 [UniParc]FASTAAdd to Basket

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    MSTTNDSLMA RRQAAVAGGV GQIHPVFTAR AENATVWDVE GREFIDFAGG    50
    IAVLNTGHLH PKVKAAVAAQ LEDFSHTCFM VLGYESYIQV CEKLNQLVPG 100
    DFAKKTALFT SGSEAVENAV KVARAYTKRA GVIAFTSGYH GRTMAALALT 150
    GKVAPYSKGM GLMSANVFRA EFPCALHGVS DDDAMASIER IFKNDAEPSD 200
    IAAIILEPVQ GEGGFYAASP AFMQRLRALC DREGIMLIAD EVQTGAGRTG 250
    TFFAMEQMGV SADITTFAKS IAGGFPLSGI TGKAEVMDAI GPGGLGGTYG 300
    GNPLACAAAL AVLEVFEEEK LLERANAIGE RIKSALNTMQ VEHPQIADVR 350
    GLGAMIAIEL MEDGKPAPQY CAQILAEARN RGLILLSCGT YGNVLRILVP 400
    LTVPDEQLGA GLGILKACFD AVLKG 425
    Length:425
    Mass (Da):44,713
    Last modified:October 3, 2006 - v1
    Checksum:i58154059F9FFE92D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000446 Genomic DNA. Translation: ABI39983.1.
    RefSeqiYP_735040.1. NC_008321.1.

    Genome annotation databases

    EnsemblBacteriaiABI39983; ABI39983; Shewmr4_2912.
    GeneIDi4253483.
    KEGGishe:Shewmr4_2912.
    PATRICi23582608. VBISheSp133532_3018.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000446 Genomic DNA. Translation: ABI39983.1 .
    RefSeqi YP_735040.1. NC_008321.1.

    3D structure databases

    ProteinModelPortali Q0HG34.
    SMRi Q0HG34. Positions 4-420.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 60480.Shewmr4_2912.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABI39983 ; ABI39983 ; Shewmr4_2912 .
    GeneIDi 4253483.
    KEGGi she:Shewmr4_2912.
    PATRICi 23582608. VBISheSp133532_3018.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K07250.
    OMAi AMCAFEV.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci SSP60480:GI2N-3030-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MR-4Imported.

    Entry informationi

    Entry nameiQ0HG34_SHESM
    AccessioniPrimary (citable) accession number: Q0HG34
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 3, 2006
    Last sequence update: October 3, 2006
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3