Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q0HG34 (Q0HG34_SHESM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=2.6.1.19 EMBL ABI39983.1
Gene names
Ordered Locus Names:Shewmr4_2912 EMBL ABI39983.1
OrganismShewanella sp. (strain MR-4) [Complete proteome] [HAMAP] EMBL ABI39983.1
Taxonomic identifier60480 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
Q0HG34 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 58154059F9FFE92D

FASTA42544,713
        10         20         30         40         50         60 
MSTTNDSLMA RRQAAVAGGV GQIHPVFTAR AENATVWDVE GREFIDFAGG IAVLNTGHLH 

        70         80         90        100        110        120 
PKVKAAVAAQ LEDFSHTCFM VLGYESYIQV CEKLNQLVPG DFAKKTALFT SGSEAVENAV 

       130        140        150        160        170        180 
KVARAYTKRA GVIAFTSGYH GRTMAALALT GKVAPYSKGM GLMSANVFRA EFPCALHGVS 

       190        200        210        220        230        240 
DDDAMASIER IFKNDAEPSD IAAIILEPVQ GEGGFYAASP AFMQRLRALC DREGIMLIAD 

       250        260        270        280        290        300 
EVQTGAGRTG TFFAMEQMGV SADITTFAKS IAGGFPLSGI TGKAEVMDAI GPGGLGGTYG 

       310        320        330        340        350        360 
GNPLACAAAL AVLEVFEEEK LLERANAIGE RIKSALNTMQ VEHPQIADVR GLGAMIAIEL 

       370        380        390        400        410        420 
MEDGKPAPQY CAQILAEARN RGLILLSCGT YGNVLRILVP LTVPDEQLGA GLGILKACFD 


AVLKG 

« Hide

References

[1]"Complete sequence of Shewanella sp. MR-4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Nealson K., Konstantinidis K., Klappenbach J., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MR-4 EMBL ABI39983.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000446 Genomic DNA. Translation: ABI39983.1.
RefSeqYP_735040.1. NC_008321.1.

3D structure databases

ProteinModelPortalQ0HG34.
SMRQ0HG34. Positions 4-420.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING60480.Shewmr4_2912.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI39983; ABI39983; Shewmr4_2912.
GeneID4253483.
KEGGshe:Shewmr4_2912.
PATRIC23582608. VBISheSp133532_3018.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMANLCAEAN.
OrthoDBEOG6QVRHN.
ProtClustDBPRK08088.

Enzyme and pathway databases

BioCycSSP60480:GI2N-3030-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0HG34_SHESM
AccessionPrimary (citable) accession number: Q0HG34
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: November 13, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)