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Protein

Putative agmatine deiminase

Gene

aguA

Organism
Shewanella sp. (strain MR-4)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Agmatine + H2O = N-carbamoylputrescine + NH3.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei361 – 3611Amidino-cysteine intermediateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciSSP60480:GI2N-3414-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative agmatine deiminaseUniRule annotation (EC:3.5.3.12UniRule annotation)
Alternative name(s):
Agmatine iminohydrolaseUniRule annotation
Gene namesi
Name:aguAUniRule annotation
Ordered Locus Names:Shewmr4_3288
OrganismiShewanella sp. (strain MR-4)
Taxonomic identifieri60480 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 370370Putative agmatine deiminasePRO_1000070572Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ0HF12.
SMRiQ0HF12. Positions 14-369.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the agmatine deiminase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000239346.
KOiK10536.
OMAiEVLLAWT.
OrthoDBiEOG6M3PB5.

Family and domain databases

HAMAPiMF_01841. Agmatine_deimin.
InterProiIPR017754. Agmatine_deiminase.
IPR007466. Peptidyl-Arg-deiminase_porph.
[Graphical view]
PfamiPF04371. PAD_porph. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03380. agmatine_aguA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0HF12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNANVDATQ LTTKPSQDGF YMPAEWAAQQ AVWMIWPYRP DNWRSAGAYA
60 70 80 90 100
QATFAKVADA IGGATPVYMG VPQAFLAEAQ KVMPSHVTLV EIDSNDCWAR
110 120 130 140 150
DTGPTVVVNA EGECRGVDWG FNAWGGHNGG LYFPWDKDEQ VAAQMLKQHG
160 170 180 190 200
FARYSAPLIL EGGSIHVDGE GTCMTTAECL LNANRNPDLT KEQIEALLRD
210 220 230 240 250
YLNVKQFIWL EEGVYMDETD GHIDNMCCFA RPGEVILHWT DDETDPQYPR
260 270 280 290 300
SKAALDVLQN TVDAQGRKLK IHLLPQPGPL YCTEEESKGV TEGTGVPRTA
310 320 330 340 350
GERLAGSYVN FLITNDRIVF PLLDPATDDI AAQKLQDIFP EHKIVGVPAR
360 370
EILLGGGNIH CITQQIPSGK
Length:370
Mass (Da):40,706
Last modified:October 3, 2006 - v1
Checksum:iC09CA4B7CAAE5E37
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000446 Genomic DNA. Translation: ABI40355.1.
RefSeqiWP_011624023.1. NC_008321.1.

Genome annotation databases

EnsemblBacteriaiABI40355; ABI40355; Shewmr4_3288.
KEGGishe:Shewmr4_3288.
PATRICi23583392. VBISheSp133532_3404.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000446 Genomic DNA. Translation: ABI40355.1.
RefSeqiWP_011624023.1. NC_008321.1.

3D structure databases

ProteinModelPortaliQ0HF12.
SMRiQ0HF12. Positions 14-369.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI40355; ABI40355; Shewmr4_3288.
KEGGishe:Shewmr4_3288.
PATRICi23583392. VBISheSp133532_3404.

Phylogenomic databases

HOGENOMiHOG000239346.
KOiK10536.
OMAiEVLLAWT.
OrthoDBiEOG6M3PB5.

Enzyme and pathway databases

BioCyciSSP60480:GI2N-3414-MONOMER.

Family and domain databases

HAMAPiMF_01841. Agmatine_deimin.
InterProiIPR017754. Agmatine_deiminase.
IPR007466. Peptidyl-Arg-deiminase_porph.
[Graphical view]
PfamiPF04371. PAD_porph. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03380. agmatine_aguA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-4.

Entry informationi

Entry nameiAGUA_SHESM
AccessioniPrimary (citable) accession number: Q0HF12
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: October 3, 2006
Last modified: November 11, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.