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Q0H8C1 (NSP3_ROTB2) Reviewed, UniProtKB/Swiss-Prot

Last modified December 15, 2009. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein attributes

Sequence length262 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the rotavirus B NSP3 family.

Ontologies

Keywords
   DomainCoiled coil
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 262262Non-structural protein 3
PRO_0000369849

Regions

Coiled coil135 – 18753 Potential

Sequences

Sequence LengthMass (Da)Tools
Q0H8C1 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: 76B1D982F1FDCF0B

FASTA26229,987
        10         20         30         40         50         60 
MAELVCDALA TLTRNTYGNN DESAKFCRMF RAMIRDSGLY SNIENWRAAF YRDRLPKRMS 

        70         80         90        100        110        120 
HSTVSIQLDN LEREVLKIRA EGFCQGYTRK ERTLNAFDLG DDGKGNTIIK PTTHLSSIIL 

       130        140        150        160        170        180 
QNSYNSAFKL PKIPDGLLEK TRCELEEEKK NNDVLKQKIK ELENTISQLE NFENEAKASE 

       190        200        210        220        230        240 
FVLEHLKFTN ESLRIQRDEA QICLVGLCNK FGLQCEIDNS IRVTESDKKG KRKGRKNRRT 

       250        260 
EVSFGAPGHN LTDQINALSD VE 

« Hide

References

[1]"Genetic analysis of an ADRV-N-like novel rotavirus strain B219 detected in a sporadic case of adult diarrhea in Bangladesh."
Alam M.M., Kobayashi N., Ishino M., Ahmed M.S., Ahmed M.U., Paul S.K., Muzumdar B.K., Hussain Z., Wang Y.H., Naik T.N.
Arch. Virol. 152:199-208(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DQ168036 Genomic RNA. Translation: ABA60396.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameNSP3_ROTB2
AccessionPrimary (citable) accession number: Q0H8C1
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: October 3, 2006
Last modified: December 15, 2009
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families