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Protein

Non-structural protein 3

Gene
N/A
Organism
Rotavirus (isolate Human/Bangladesh/ADRV-N B219/2002) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-B219))
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 3
Short name:
NSP3
OrganismiRotavirus (isolate Human/Bangladesh/ADRV-N B219/2002) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-B219))
Taxonomic identifieri348136 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusunclassified rotaviruses
Virus hostiHomo sapiens (Human) [TaxID: 9606]
ProteomesiUP000008656 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 262262Non-structural protein 3PRO_0000369849Add
BLAST

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili135 – 18753Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the rotavirus B NSP3 family.Curated

Keywords - Domaini

Coiled coil

Sequencei

Sequence statusi: Complete.

Q0H8C1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAELVCDALA TLTRNTYGNN DESAKFCRMF RAMIRDSGLY SNIENWRAAF
60 70 80 90 100
YRDRLPKRMS HSTVSIQLDN LEREVLKIRA EGFCQGYTRK ERTLNAFDLG
110 120 130 140 150
DDGKGNTIIK PTTHLSSIIL QNSYNSAFKL PKIPDGLLEK TRCELEEEKK
160 170 180 190 200
NNDVLKQKIK ELENTISQLE NFENEAKASE FVLEHLKFTN ESLRIQRDEA
210 220 230 240 250
QICLVGLCNK FGLQCEIDNS IRVTESDKKG KRKGRKNRRT EVSFGAPGHN
260
LTDQINALSD VE
Length:262
Mass (Da):29,987
Last modified:October 3, 2006 - v1
Checksum:i76B1D982F1FDCF0B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ168036 Genomic RNA. Translation: ABA60396.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ168036 Genomic RNA. Translation: ABA60396.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Genetic analysis of an ADRV-N-like novel rotavirus strain B219 detected in a sporadic case of adult diarrhea in Bangladesh."
    Alam M.M., Kobayashi N., Ishino M., Ahmed M.S., Ahmed M.U., Paul S.K., Muzumdar B.K., Hussain Z., Wang Y.H., Naik T.N.
    Arch. Virol. 152:199-208(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSP3_ROTB2
AccessioniPrimary (citable) accession number: Q0H8C1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: October 3, 2006
Last modified: January 7, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.