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Protein
Submitted name:

Uncharacterized protein

Gene

R2601_13739

Organism
Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:R2601_13739Imported
OrganismiPelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601)Imported
Taxonomic identifieri314265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaePelagibaca
Proteomesi
  • UP000006230 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2419HelicalSequence analysisAdd
BLAST
Transmembranei53 – 7624HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi314265.R2601_13739.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG41060AV. Bacteria.
ENOG41128GD. LUCA.
OrthoDBiPOG091H0Y6S.

Family and domain databases

InterProiIPR009935. DUF1467.
[Graphical view]
PfamiPF07330. DUF1467. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0FRG6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLTSALVLY AVIWFMTFLI VIPFRLETQG DRGEVVEGTH ASSPEVHNLK
60 70 80 90
RKALITTLIA LVLWAVIAGI IISGWITVRE LDSWMFNRMG PPSGL
Length:95
Mass (Da):10,538
Last modified:October 17, 2006 - v1
Checksum:iD4C2CE10E575F32F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AATQ01000011 Genomic DNA. Translation: EAU46888.1.
RefSeqiWP_007795086.1. NZ_DS022276.1.

Genome annotation databases

EnsemblBacteriaiEAU46888; EAU46888; R2601_13739.
PATRICi28144712. VBIRosSp73948_1062.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AATQ01000011 Genomic DNA. Translation: EAU46888.1.
RefSeqiWP_007795086.1. NZ_DS022276.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi314265.R2601_13739.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEAU46888; EAU46888; R2601_13739.
PATRICi28144712. VBIRosSp73948_1062.

Phylogenomic databases

eggNOGiENOG41060AV. Bacteria.
ENOG41128GD. LUCA.
OrthoDBiPOG091H0Y6S.

Family and domain databases

InterProiIPR009935. DUF1467.
[Graphical view]
PfamiPF07330. DUF1467. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ0FRG6_PELBH
AccessioniPrimary (citable) accession number: Q0FRG6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: September 7, 2016
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.