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Q0DWQ1

- MGDG3_ORYSJ

UniProt

Q0DWQ1 - MGDG3_ORYSJ

Protein

Probable monogalactosyldiacylglycerol synthase 3, chloroplastic

Gene

MGD3

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 2 (02 Sep 2008)
      Previous versions | rss
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    Functioni

    Involved in the synthesis of the major structural component of photosynthetic membranes.By similarity

    Catalytic activityi

    UDP-alpha-D-galactose + 1,2-diacyl-sn-glycerol = UDP + 3-beta-D-galactosyl-1,2-diacyl-sn-glycerol.

    GO - Molecular functioni

    1. 1,2-diacylglycerol 3-beta-galactosyltransferase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. glycolipid biosynthetic process Source: InterPro
    2. lipid glycosylation Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT28. Glycosyltransferase Family 28.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable monogalactosyldiacylglycerol synthase 3, chloroplastic (EC:2.4.1.46)
    Short name:
    OsMGD3
    Gene namesi
    Name:MGD3
    Ordered Locus Names:Os02g0802700, LOC_Os02g55910
    ORF Names:OsJ_008461, P0689B12.17
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 2

    Organism-specific databases

    GrameneiQ0DWQ1.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Chloroplast, Membrane, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 6060ChloroplastSequence AnalysisAdd
    BLAST
    Chaini61 – 508448Probable monogalactosyldiacylglycerol synthase 3, chloroplasticPRO_0000349430Add
    BLAST

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi4 – 107Poly-Ser
    Compositional biasi83 – 864Poly-Glu

    Sequence similaritiesi

    Belongs to the glycosyltransferase 28 family.Curated

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0707.
    HOGENOMiHOG000239591.
    KOiK03715.

    Family and domain databases

    InterProiIPR009695. Diacylglyc_glucosyltr_N.
    IPR007235. Glyco_trans_28_C.
    [Graphical view]
    PfamiPF04101. Glyco_tran_28_C. 1 hit.
    PF06925. MGDG_synth. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q0DWQ1-1 [UniParc]FASTAAdd to Basket

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    MAASSSSSSS MASPRGRSIR ETVLETVAAY HQQQRMRRKF RKSLSYAGEL    50
    SSAGRARGEG GASSSASTTS LCGPDEDDEP FWEEEEGTVE LVQLGANRAK 100
    NVLILMSDTG GGHRASAQAI KDPFRIEFGD DYRVFVKDLC KDHAGWPLNN 150
    MESSYKFMVK HVQLWKVAFH TTSPRWVHCF YLAALASFYA KKVEAGLKKY 200
    KPDIIISVHP LMQHIPLWVL KWQGLQNRVV FVTVITDLNT CHPTWFHADV 250
    NRCYCPSEEV AKRAALDDLQ PSQIRVFGLP IRPSFCRAVL VKDDLRKELE 300
    LDPELPAVLL MGGGEGMGPV KKTAKALGES LFDKELGKPI GQLIVICGRN 350
    KTLSSSLQAL EWKIPIKVRG FETQMEKWMG ACDCIITKAG PGTIAEALIR 400
    GLPIILNDFI PGQEVGNVPY VVDNGAGVFS KSSRETAKLV ARWFGPDSDE 450
    LKRMSEKALK LAQPEAVFDI VRDIHELSRE QGVISQISSS LTSSFFIPSP 500
    ETTPIQLM 508
    Length:508
    Mass (Da):56,243
    Last modified:September 2, 2008 - v2
    Checksum:i658448F9B64C1C32
    GO

    Sequence cautioni

    The sequence BAD36030.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence BAF10337.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008208 Genomic DNA. Translation: BAF10337.1. Sequence problems.
    AP005056 Genomic DNA. Translation: BAD36030.1. Sequence problems.
    CM000139 Genomic DNA. No translation available.
    RefSeqiNP_001048423.1. NM_001054958.1.
    UniGeneiOs.5288.

    Genome annotation databases

    GeneIDi4331045.
    KEGGiosa:4331045.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008208 Genomic DNA. Translation: BAF10337.1 . Sequence problems.
    AP005056 Genomic DNA. Translation: BAD36030.1 . Sequence problems.
    CM000139 Genomic DNA. No translation available.
    RefSeqi NP_001048423.1. NM_001054958.1.
    UniGenei Os.5288.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GT28. Glycosyltransferase Family 28.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4331045.
    KEGGi osa:4331045.

    Organism-specific databases

    Gramenei Q0DWQ1.

    Phylogenomic databases

    eggNOGi COG0707.
    HOGENOMi HOG000239591.
    KOi K03715.

    Family and domain databases

    InterProi IPR009695. Diacylglyc_glucosyltr_N.
    IPR007235. Glyco_trans_28_C.
    [Graphical view ]
    Pfami PF04101. Glyco_tran_28_C. 1 hit.
    PF06925. MGDG_synth. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiMGDG3_ORYSJ
    AccessioniPrimary (citable) accession number: Q0DWQ1
    Secondary accession number(s): A3ACD9, Q69SK2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 2, 2008
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 46 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3